[HTML][HTML] Beyond the exome: what's next in diagnostic testing for Mendelian conditions

MH Wojcik, CM Reuter, S Marwaha… - The American Journal of …, 2023 - cell.com
Despite advances in clinical genetic testing, including the introduction of exome sequencing
(ES), more than 50% of individuals with a suspected Mendelian condition lack a precise …

Towards improved genetic diagnosis of human differences of sex development

EC Délot, E Vilain - Nature Reviews Genetics, 2021 - nature.com
Despite being collectively among the most frequent congenital developmental conditions
worldwide, differences of sex development (DSD) lack recognition and research funding. As …

Significantly improving the quality of genome assemblies through curation

K Howe, W Chow, J Collins, S Pelan, DL Pointon… - …, 2021 - academic.oup.com
Genome sequence assemblies provide the basis for our understanding of biology.
Generating error-free assemblies is therefore the ultimate, but sadly still unachieved goal of …

Optical genome mapping enables constitutional chromosomal aberration detection

T Mantere, K Neveling, C Pebrel-Richard… - The American Journal of …, 2021 - cell.com
Chromosomal aberrations including structural variations (SVs) are a major cause of human
genetic diseases. Their detection in clinical routine still relies on standard cytogenetics …

Expectations and blind spots for structural variation detection from long-read assemblies and short-read genome sequencing technologies

X Zhao, RL Collins, WP Lee, AM Weber, Y Jun… - The American Journal of …, 2021 - cell.com
Virtually all genome sequencing efforts in national biobanks, complex and Mendelian
disease programs, and medical genetic initiatives are reliant upon short-read whole …

Next-generation cytogenetics: Comprehensive assessment of 52 hematological malignancy genomes by optical genome mapping

K Neveling, T Mantere, S Vermeulen… - The American Journal of …, 2021 - cell.com
Somatic structural variants (SVs) are important drivers of cancer development and
progression. In a diagnostic set-up, especially for hematological malignancies, the …

Improving laboratory animal genetic reporting: LAG-R guidelines

L Teboul, J Amos-Landgraf, FJ Benavides… - Nature …, 2024 - nature.com
The biomedical research community addresses reproducibility challenges in animal studies
through standardized nomenclature, improved experimental design, transparent reporting …

The clinical utility of optical genome mapping for the assessment of genomic aberrations in acute lymphoblastic leukemia

JL Lühmann, M Stelter, M Wolter, J Kater, J Lentes… - Cancers, 2021 - mdpi.com
Simple Summary The stratification of childhood ALL is currently based on various diagnostic
assays. This study investigates the feasibility of Optical Genome Mapping (OGM) to …

[HTML][HTML] Multisite assessment of optical genome mapping for analysis of structural variants in constitutional postnatal cases

MA Iqbal, U Broeckel, B Levy, S Skinner… - The Journal of Molecular …, 2023 - Elsevier
This study compares optical genome mapping (OGM) performed at multiple sites with
current standard-of-care (SOC) methods used in clinical cytogenetics. This study included …

OMIXCARE: OMICS technologies solved about 33% of the patients with heterogeneous rare neuro-developmental disorders and negative exome sequencing results …

E Colin, Y Duffourd, E Tisserant, R Relator… - Frontiers in Cell and …, 2022 - frontiersin.org
Purpose: Patients with rare or ultra-rare genetic diseases, which affect 350 million people
worldwide, may experience a diagnostic odyssey. High-throughput sequencing leads to an …