Roles of transposable elements in the regulation of mammalian transcription

R Fueyo, J Judd, C Feschotte, J Wysocka - Nature reviews Molecular …, 2022 - nature.com
Transposable elements (TEs) comprise about half of the mammalian genome. TEs often
contain sequences capable of recruiting the host transcription machinery, which they use to …

Insights into epigenetic patterns in mammalian early embryos

R Xu, C Li, X Liu, S Gao - Protein & cell, 2021 - academic.oup.com
Mammalian fertilization begins with the fusion of two specialized gametes, followed by major
epigenetic remodeling leading to the formation of a totipotent embryo. During the …

NR5A2 connects zygotic genome activation to the first lineage segregation in totipotent embryos

F Lai, L Li, X Hu, B Liu, Z Zhu, L Liu, Q Fan, H Tian… - Cell Research, 2023 - nature.com
Zygotic genome activation (ZGA) marks the beginning of the embryonic program for a
totipotent embryo, which gives rise to the inner cell mass (ICM) where pluripotent epiblast …

Locus-specific expression of transposable elements in single cells with CELLO-seq

RV Berrens, A Yang, CE Laumer, ATL Lun… - Nature …, 2022 - nature.com
Transposable elements (TEs) regulate diverse biological processes, from early development
to cancer. Expression of young TEs is difficult to measure with next-generation, single-cell …

[HTML][HTML] A single-cell transcriptomics CRISPR-activation screen identifies epigenetic regulators of the zygotic genome activation program

C Alda-Catalinas, D Bredikhin, I Hernando-Herraez… - Cell systems, 2020 - cell.com
Zygotic genome activation (ZGA) is an essential transcriptional event in embryonic
development that coincides with extensive epigenetic reprogramming. Complex …

TRF2-mediated telomere protection is dispensable in pluripotent stem cells

M Markiewicz-Potoczny, A Lobanova, AM Loeb… - Nature, 2021 - nature.com
In mammals, telomere protection is mediated by the essential protein TRF2, which binds
chromosome ends and ensures genome integrity,. TRF2 depletion results in end-to-end …

ZAR1 and ZAR2 are required for oocyte meiotic maturation by regulating the maternal transcriptome and mRNA translational activation

Y Rong, SY Ji, YZ Zhu, YW Wu, L Shen… - Nucleic acids …, 2019 - academic.oup.com
Zar1 was one of the earliest mammalian maternal-effect genes to be identified. Embryos
derived from Zar1-null female mice are blocked before zygotic genome activation; however …

Epigenetic reprogramming in early animal development

Z Du, K Zhang, W Xie - Cold Spring Harbor Perspectives …, 2022 - cshperspectives.cshlp.org
Dramatic nuclear reorganization occurs during early development to convert terminally
differentiated gametes to a totipotent zygote, which then gives rise to an embryo. Aberrant …

Rise and SINE: Roles of transcription factors and retrotransposons in zygotic genome activation

P Kravchenko, K Tachibana - Nature Reviews Molecular Cell Biology, 2024 - nature.com
In sexually reproducing organisms, life begins with the fusion of transcriptionally silent
gametes, the oocyte and sperm. Although initiation of transcription in the embryo, known as …

Retrotransposon renaissance in early embryos

Y Guo, TD Li, AJ Modzelewski, H Siomi - Trends in Genetics, 2024 - cell.com
Despite being the predominant genetic elements in mammalian genomes, retrotransposons
were often dismissed as genomic parasites with ambiguous biological significance …