A pragmatic guide to enrichment strategies for mass spectrometry–based glycoproteomics

NM Riley, CR Bertozzi, SJ Pitteri - Molecular & Cellular Proteomics, 2021 - ASBMB
Glycosylation is a prevalent, yet heterogeneous modification with a broad range of
implications in molecular biology. This heterogeneity precludes enrichment strategies that …

Meta-heterogeneity: evaluating and describing the diversity in glycosylation between sites on the same glycoprotein

T Čaval, AJR Heck, KR Reiding - Molecular & Cellular Proteomics, 2021 - ASBMB
Mass spectrometry–based glycoproteomics has gone through some incredible
developments over the last few years. Technological advances in glycopeptide enrichment …

[HTML][HTML] Proteogenomic characterization of pancreatic ductal adenocarcinoma

L Cao, C Huang, DC Zhou, Y Hu, TM Lih, SR Savage… - Cell, 2021 - cell.com
Pancreatic ductal adenocarcinoma (PDAC) is a highly aggressive cancer with poor patient
survival. Toward understanding the underlying molecular alterations that drive PDAC …

Optimal Dissociation Methods Differ for N- and O-Glycopeptides

NM Riley, SA Malaker, MD Driessen… - Journal of proteome …, 2020 - ACS Publications
Site-specific characterization of glycosylation requires intact glycopeptide analysis, and
recent efforts have focused on how to best interrogate glycopeptides using tandem mass …

Capturing site-specific heterogeneity with large-scale N-glycoproteome analysis

NM Riley, AS Hebert, MS Westphall, JJ Coon - Nature communications, 2019 - nature.com
Protein glycosylation is a highly important, yet poorly understood protein post-translational
modification. Thousands of possible glycan structures and compositions create potential for …

Recent advances in software tools for more generic and precise intact glycopeptide analysis

W Cao, M Liu, S Kong, M Wu, Y Zhang… - Molecular & Cellular …, 2021 - ASBMB
Intact glycopeptide identification has long been known as a key and challenging barrier to
the comprehensive and accurate understanding the role of glycosylation in an organism …

A metabolic inhibitor blocks cellular fucosylation and enables production of afucosylated antibodies

PA Gilormini, VN Thota, A Fers-Lidou… - Proceedings of the …, 2024 - pnas.org
The fucosylation of glycoproteins regulates diverse physiological processes. Inhibitors that
can control cellular levels of protein fucosylation have consequently emerged as being of …

Towards structure-focused glycoproteomics

A Chernykh, R Kawahara… - Biochemical Society …, 2021 - portlandpress.com
Facilitated by advances in the separation sciences, mass spectrometry and informatics,
glycoproteomics, the analysis of intact glycopeptides at scale, has recently matured enabling …

ZIC-cHILIC-based stageTip for simultaneous glycopeptide enrichment and fractionation toward large-scale N-sialoglycoproteomics

YJ Chen, TC Yen, YH Lin, YL Chen, KH Khoo… - Analytical …, 2021 - ACS Publications
Alterations of protein glycosylation are closely related with pathophysiological regulation.
Due to the structural macro-and microheterogeneity, low stoichiometry, and low ionization …

Comprehensive analysis of the glycome and glycoproteome of bovine milk-derived exosomes

W Chen, R Wang, D Li, C Zuo, P Wen… - Journal of Agricultural …, 2020 - ACS Publications
Bovine milk-derived exosomes (BMDEs) have potential applications in the pharmaceutical
industry as drug delivery carriers. A comprehensive analysis of protein glycosylation in …