Twenty years of plant genome sequencing: achievements and challenges
Y Sun, L Shang, QH Zhu, L Fan, L Guo - Trends in Plant Science, 2022 - cell.com
Publication of the complete genome sequence of Arabidopsis thaliana, the first plant
reference genome, in December 2000 heralded the beginning of the plant genome era …
reference genome, in December 2000 heralded the beginning of the plant genome era …
Biosynthesis and regulation of phenylpropanoids in plants
Y Deng, S Lu - Critical reviews in plant sciences, 2017 - Taylor & Francis
Phenylpropanoids are a large class of plant secondary metabolites derived from aromatic
amino acids phenylalanine in most plants or tyrosine in partial monocots. It mainly includes …
amino acids phenylalanine in most plants or tyrosine in partial monocots. It mainly includes …
A telomere-to-telomere gap-free reference genome of watermelon and its mutation library provide important resources for gene discovery and breeding
Y Deng, S Liu, Y Zhang, J Tan, X Li, X Chu, B Xu… - Molecular plant, 2022 - cell.com
Watermelon, Citrullus lanatus, is the world's third largest fruit crop. Reference genomes with
gaps and a narrow genetic base hinder functional genomics and genetic improvement of …
gaps and a narrow genetic base hinder functional genomics and genetic improvement of …
Root-secreted bitter triterpene modulates the rhizosphere microbiota to improve plant fitness
Y Zhong, W Xun, X Wang, S Tian, Y Zhang, D Li… - Nature plants, 2022 - nature.com
Underground microbial ecosystems have profound impacts on plant health,,,–. Recently,
essential roles have been shown for plant specialized metabolites in shaping the …
essential roles have been shown for plant specialized metabolites in shaping the …
Gene duplication and evolution in recurring polyploidization–diploidization cycles in plants
Background The sharp increase of plant genome and transcriptome data provide valuable
resources to investigate evolutionary consequences of gene duplication in a range of taxa …
resources to investigate evolutionary consequences of gene duplication in a range of taxa …
The epigenome and transcriptional dynamics of fruit ripening
J Giovannoni, C Nguyen, B Ampofo… - Annual Review of …, 2017 - annualreviews.org
Fruit has evolved myriad forms that facilitate seed dispersal in varied environmental and
ecological contexts. Because fleshy fruits become attractive and nutritious to seed …
ecological contexts. Because fleshy fruits become attractive and nutritious to seed …
The Peach v2. 0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity
Background The availability of the peach genome sequence has fostered relevant research
in peach and related Prunus species enabling the identification of genes underlying …
in peach and related Prunus species enabling the identification of genes underlying …
Origin and domestication of Cucurbitaceae crops: insights from phylogenies, genomics and archaeology
Some of the World's most valuable crops, including watermelon, honey melon, cucumber,
squash, zucchini and pumpkin, belong to the family Cucurbitaceae. We review insights on …
squash, zucchini and pumpkin, belong to the family Cucurbitaceae. We review insights on …
A comprehensive genome variation map of melon identifies multiple domestication events and loci influencing agronomic traits
G Zhao, Q Lian, Z Zhang, Q Fu, Y He, S Ma… - Nature Genetics, 2019 - nature.com
Melon is an economically important fruit crop that has been cultivated for thousands of years;
however, the genetic basis and history of its domestication still remain largely unknown …
however, the genetic basis and history of its domestication still remain largely unknown …
Evolution of plant genome architecture
We have witnessed an explosion in our understanding of the evolution and structure of plant
genomes in recent years. Here, we highlight three important emergent realizations:(1) that …
genomes in recent years. Here, we highlight three important emergent realizations:(1) that …