[图书][B] Modelling protocells

R Serra, M Villani - 2017 - Springer
It took quite a long time to complete this book. More than 20 years had elapsed since I wrote
my last volume as an author, not just as an editor. And I felt it important to find again the …

The search for candidate relevant subsets of variables in complex systems

M Villani, A Roli, A Filisetti, M Fiorucci, I Poli, R Serra - Artificial life, 2015 - direct.mit.edu
We describe a method to identify relevant subsets of variables, useful to understand the
organization of a dynamical system. The variables belonging to a relevant subset should …

The detection of intermediate-level emergent structures and patterns

M Villani, A Filisetti, S Benedettini, A Roli… - Advances in Artificial …, 2013 - iris.unimore.it
Artificial life is largely concerned with systems that exhibit different emergent phenomena;
yet, the identification of emergent structures is frequently a difficult challenge. In this paper …

Growth and division in a dynamic protocell model

M Villani, A Filisetti, A Graudenzi, C Damiani, T Carletti… - Life, 2014 - mdpi.com
In this paper a new model of growing and dividing protocells is described, whose main
features are (i) a lipid container that grows according to the composition of the molecular …

On RAF sets and autocatalytic cycles in random reaction networks

A Filisetti, M Villani, C Damiani, A Graudenzi… - Advances in Artificial …, 2014 - Springer
The emergence of autocatalytic sets of molecules seems to have played an important role in
the origin of life context. Although the possibility to reproduce this emergence in laboratory …

Parameter sensitivity analysis of stochastic models: Application to catalytic reaction networks

C Damiani, A Filisetti, A Graudenzi, P Lecca - Computational biology and …, 2013 - Elsevier
A general numerical methodology for parametric sensitivity analysis is proposed, which
allows to determine the parameters exerting the greatest influence on the output of a …

A stochastic model of catalytic reaction networks in protocells

R Serra, A Filisetti, M Villani, A Graudenzi, C Damiani… - Natural Computing, 2014 - Springer
Protocells are supposed to have played a key role in the self-organizing processes leading
to the emergence of life. Existing models either (i) describe protocell architecture and …

Feedback in Batesian mimetic systems

D Kizirian, J Manuel Padial, N Povelikin… - Biological Journal of …, 2023 - academic.oup.com
We propose a feedback model for Batesian mimetic trophic system dynamics that integrates
evolutionary and ecological processes including those not directly related to mimicry such …

On the dynamics of autocatalytic cycles in protocell models

M Villani, A Filisetti, M Nadini, R Serra - … 2015, Bari, Italy, September 22-25 …, 2016 - Springer
The emergence of autocatalytic sets of molecules seems to have played an important role in
the origin of life, allowing a sustainable systems' growth and reproduction. Several …

The role of backward reactions in a stochastic model of catalytic reaction networks

A Filisetti, A Graudenzi, C Damiani, M Villani… - Advances in Artificial …, 2013 - iris.unimore.it
We investigate the role of backward reactions in a stochastic model of catalytic reaction
network, with specific regard to the influence on the emergence of autocatalytic sets (ACSs) …