Exploring free-energy landscapes of intrinsically disordered proteins at atomic resolution using NMR spectroscopy

MR Jensen, M Zweckstetter, J Huang… - Chemical …, 2014 - ACS Publications
The last 15 years have seen a paradigm shift in our understanding of protein biochemistry,
with the realization that an unexpectedly high fraction of the human genome codes for …

Dynamic protein interaction networks and new structural paradigms in signaling

V Csizmok, AV Follis, RW Kriwacki… - Chemical …, 2016 - ACS Publications
Understanding signaling and other complex biological processes requires elucidating the
critical roles of intrinsically disordered proteins (IDPs) and regions (IDRs), which represent∼ …

Global structure of the intrinsically disordered protein tau emerges from its local structure

LS Stelzl, LM Pietrek, A Holla, J Oroz, M Sikora… - Jacs Au, 2022 - ACS Publications
The paradigmatic disordered protein tau plays an important role in neuronal function and
neurodegenerative diseases. To disentangle the factors controlling the balance between …

Flexible-meccano: a tool for the generation of explicit ensemble descriptions of intrinsically disordered proteins and their associated experimental observables

V Ozenne, F Bauer, L Salmon, J Huang… - …, 2012 - academic.oup.com
Abstract Motivation: Intrinsically disordered proteins (IDPs) represent a significant fraction of
the human proteome. The classical structure function paradigm that has successfully …

NMR characterization of long-range order in intrinsically disordered proteins

L Salmon, G Nodet, V Ozenne, G Yin… - Journal of the …, 2010 - ACS Publications
Intrinsically disordered proteins (IDPs) are predicted to represent a significant fraction of the
human genome, and the development of meaningful molecular descriptions of these …

Describing intrinsically disordered proteins at atomic resolution by NMR

MR Jensen, RWH Ruigrok, M Blackledge - Current opinion in structural …, 2013 - Elsevier
There is growing interest in the development of physical methods to study the
conformational behaviour and biological activity of intrinsically disordered proteins (IDPs). In …

Biophysical characterization of intrinsically disordered proteins

D Eliezer - Current opinion in structural biology, 2009 - Elsevier
The challenges associated with the structural characterization of disordered proteins have
resulted in the application of a host of biophysical methods to such systems. NMR …

pE-DB: a database of structural ensembles of intrinsically disordered and of unfolded proteins

M Varadi, S Kosol, P Lebrun, E Valentini… - Nucleic acids …, 2014 - academic.oup.com
The goal of pE-DB (http://pedb. vib. be) is to serve as an openly accessible database for the
deposition of structural ensembles of intrinsically disordered proteins (IDPs) and of …

Structure/function implications in a dynamic complex of the intrinsically disordered Sic1 with the Cdc4 subunit of an SCF ubiquitin ligase

T Mittag, J Marsh, A Grishaev, S Orlicky, H Lin… - Structure, 2010 - cell.com
Intrinsically disordered proteins can form highly dynamic complexes with partner proteins.
One such dynamic complex involves the intrinsically disordered Sic1 with its partner Cdc4 in …

Predictive atomic resolution descriptions of intrinsically disordered hTau40 and α-synuclein in solution from NMR and small angle scattering

M Schwalbe, V Ozenne, S Bibow, M Jaremko… - Structure, 2014 - cell.com
The development of molecular descriptions of intrinsically disordered proteins (IDPs) is
essential for elucidating conformational transitions that characterize common …