Seeing (and using) the light: recent developments in bioluminescence technology

AC Love, JA Prescher - Cell Chemical Biology, 2020 - cell.com
Bioluminescence has long been used to image biological processes in vivo. This technology
features luciferase enzymes and luciferin small molecules that produce visible light …

High-throughput screening, next generation sequencing and machine learning: advanced methods in enzyme engineering

R Vanella, G Kovacevic, V Doffini… - Chemical …, 2022 - pubs.rsc.org
Enzyme engineering is an important biotechnological process capable of generating
tailored biocatalysts for applications in industrial chemical conversion and biopharma …

Improving protein expression, stability, and function with ProteinMPNN

KH Sumida, R Núñez-Franco, I Kalvet… - Journal of the …, 2024 - ACS Publications
Natural proteins are highly optimized for function but are often difficult to produce at a scale
suitable for biotechnological applications due to poor expression in heterologous systems …

A high-throughput screening platform for enzymes active on mucin-type O-glycoproteins

JF Wardman, L Sim, J Liu, TA Howard… - Nature Chemical …, 2023 - nature.com
Mucin-type O-glycosylation is a post-translational modification present at the interface
between cells where it has important roles in cellular communication. However, deciphering …

Rational redesign of enzyme via the combination of quantum mechanics/molecular mechanics, molecular dynamics, and structural biology study

HY Lin, X Chen, J Dong, JF Yang, H Xiao… - Journal of the …, 2021 - ACS Publications
Increasing demands for efficient and versatile chemical reactions have prompted
innovations in enzyme engineering. A major challenge in engineering α-ketoglutarate …

A temperature-inducible protein module for control of mammalian cell fate

W Benman, Z Huang, P Iyengar, D Wilde… - Nature …, 2025 - nature.com
Inducible protein switches are currently limited for use in tissues and organisms because
common inducers cannot be controlled with precision in space and time in optically dense …

Organelle-dependent polyprotein designs enable stoichiometric expression of nitrogen fixation components targeted to mitochondria

J Yang, N Xiang, Y Liu, C Guo, C Li… - Proceedings of the …, 2023 - National Acad Sciences
Introducing nitrogen fixation (nif) genes into eukaryotic genomes and targeting Nif
components to mitochondria or chloroplasts is a promising strategy for engineering nitrogen …

A molecular calcium integrator reveals a striatal cell type driving aversion

CK Kim, MI Sanchez, P Hoerbelt, LE Fenno… - Cell, 2020 - cell.com
The ability to record transient cellular events in the DNA or RNA of cells would enable
precise, large-scale analysis, selection, and reprogramming of heterogeneous cell …

[HTML][HTML] Unlocking the potential of optogenetics in microbial applications

M Benisch, SK Aoki, M Khammash - Current Opinion in Microbiology, 2024 - Elsevier
Optogenetics is a powerful approach that enables researchers to use light to dynamically
manipulate cellular behavior. Since the first published use of optogenetics in synthetic …

Making the cut with protease engineering

RP Dyer, GA Weiss - Cell chemical biology, 2022 - cell.com
Proteases cut with enviable precision and regulate diverse molecular events in biology.
Such qualities drive a seemingly inexhaustible appetite for proteases with new activities and …