The notable achievements and the prospects of bacterial pathogen genomics

GD Amoutzias, M Nikolaidis, A Hesketh - Microorganisms, 2022 - mdpi.com
Throughout the entirety of human history, bacterial pathogens have played an important role
and even shaped the fate of civilizations. The application of genomics within the last 27 …

Plasma microbial cell-free DNA sequencing from over 15,000 patients identified a broad spectrum of pathogens

SY Park, EJ Chang, N Ledeboer… - Journal of Clinical …, 2023 - Am Soc Microbiol
Microbial cell-free DNA (mcfDNA) sequencing is an emerging infectious disease diagnostic
tool which enables unbiased pathogen detection and quantification from plasma. The Karius …

[图书][B] Nelson's pediatric antimicrobial therapy

JS Bradley - 2012 - publications.aap.org
Welcome to the 29th edition of Nelson's Pediatric Antimicrobial Therapy, the third edition
written during the COVID-19 pandemic, which continues to significantly affect our lives and …

Clinical Impact of Pleural Fluid Streptococcus pneumoniae Polymerase Chain Reaction Testing in Children With Complicated Pneumonia

EC Ho, KE Olson, M Butler, M Birkholz… - Clinical Infectious …, 2024 - academic.oup.com
Abstract Background While Streptococcus pneumoniae (Spn) is the leading cause of
pediatric complicated community-acquired pneumonia (cCAP), it is infrequently recovered …

Analytical and clinical validation of direct detection of antimicrobial resistance markers by plasma microbial cell-free DNA sequencing

FC Christians, J Akhund-Zade, K Jarman… - Journal of Clinical …, 2024 - journals.asm.org
Sequencing of plasma microbial cell-free DNA (mcfDNA) has gained increased acceptance
as a valuable adjunct to standard-of-care testing for diagnosis of infections throughout the …

[HTML][HTML] Next generation sequencing to detect pathogens causing paediatric community-acquired pneumonia-A systematic review and meta-analysis

K Chawla, R Shaji, N Siddalingaiah, SM Pk… - Indian Journal of …, 2024 - Elsevier
Background Paediatric community-acquired pneumonia (CAP) is a major public health
challenge in children, requiring accurate and timely diagnosis of causative pathogens for …

[HTML][HTML] Pathogen kinetics and detection by next-generation sequencing in pediatric complicated pneumonia

KM Rodriguez, KL Perofsky, N Ramchandar… - … and Infectious Disease, 2024 - Elsevier
Pediatric pneumonia can be severe and result in empyema. Next-generation sequencing
(NGS) may broadly detect pathogens though, optimal timing and impact of sample type on …

Elucidating the Clinical Interpretation and Impact of a Positive Plasma Cell-Free DNA Metagenomics Test Result—A Single Center Retrospective Study

H Vinh Dong, T Saleh, I Kaur… - The Journal of Applied …, 2024 - academic.oup.com
Abstract Background The Karius Test (KT), a cell-free DNA metagenomic next-generation
sequencing assay, has potential to improve diagnostic evaluation of infectious diseases …

Cell free microbial DNA utilization at a children's hospital

R Craver, S Collier, M Anderson - Fetal and Pediatric Pathology, 2024 - Taylor & Francis
Background: We investigated the utilization of cell free microbial DNA (cfDNA) at a
Children's Hospital. Materials and Methods: cfDNA results were assessed regarding the …

Efficacy of microbial cell‐free DNA testing for detecting pathogens in pediatric patients with head and neck infections—An initial study

A Xu, A Miranda, HF Lin, T Din… - Pediatric …, 2025 - Wiley Online Library
Pediatric ear, nose, and throat (ENT) infections are common and vary from simple to life-
threatening cases, including complicated sinusitis, deep neck space abscesses, and …