Signalling dynamics in vertebrate segmentation

A Hubaud, O Pourquié - Nature reviews Molecular cell biology, 2014 - nature.com
Segmentation of the paraxial mesoderm is a major event of vertebrate development that
establishes the metameric patterning of the body axis. This process involves the periodic …

Mechanisms of Notch signaling: a simple logic deployed in time and space

D Henrique, F Schweisguth - Development, 2019 - journals.biologists.com
Most cells in our body communicate during development and throughout life via Notch
receptors and their ligands. Notch receptors relay information from the cell surface to the …

Models in biology:'accurate descriptions of our pathetic thinking'

J Gunawardena - BMC biology, 2014 - Springer
In this essay I will sketch some ideas for how to think about models in biology. I will begin by
trying to dispel the myth that quantitative modeling is somehow foreign to biology. I will then …

Cellular and molecular control of vertebrate somitogenesis

Y Miao, O Pourquié - Nature Reviews Molecular Cell Biology, 2024 - nature.com
Segmentation is a fundamental feature of the vertebrate body plan. This metameric
organization is first implemented by somitogenesis in the early embryo, when paired …

The computational capabilities of many-to-many protein interaction networks

HE Klumpe, J Garcia-Ojalvo, MB Elowitz, YE Antebi - Cell Systems, 2023 - cell.com
Many biological circuits comprise sets of protein variants that interact with one another in a
many-to-many, or promiscuous, fashion. These architectures can provide powerful …

Stochastic gene expression and environmental stressors trigger variable somite segmentation phenotypes

K Keseroglu, OQH Zinani, S Keskin, H Seawall… - Nature …, 2023 - nature.com
Mutations of several genes cause incomplete penetrance and variable expressivity of
phenotypes, which are usually attributed to modifier genes or gene-environment …

Arthropod segmentation

E Clark, AD Peel, M Akam - Development, 2019 - journals.biologists.com
There is now compelling evidence that many arthropods pattern their segments using a
clock-and-wavefront mechanism, analogous to that operating during vertebrate …

[HTML][HTML] Single-cell-resolution imaging of the impact of Notch signaling and mitosis on segmentation clock dynamics

EA Delaune, P François, NP Shih, SL Amacher - Developmental cell, 2012 - cell.com
Vertebrate body segmentation is controlled by the segmentation clock, a molecular oscillator
involving transcriptional oscillations of cyclic genes in presomitic mesoderm cells. The rapid …

Ripply suppresses Tbx6 to induce dynamic-to-static conversion in somite segmentation

T Yabe, K Uriu, S Takada - Nature Communications, 2023 - nature.com
The metameric pattern of somites is created based on oscillatory expression of clock genes
in presomitic mesoderm. However, the mechanism for converting the dynamic oscillation to …

Formation and segmentation of the vertebrate body axis

B Bénazéraf, O Pourquié - Annual review of cell and …, 2013 - annualreviews.org
Body axis elongation and segmentation are major morphogenetic events that take place
concomitantly during vertebrate embryonic development. Establishment of the final body …