Plant pathogenic fungi

G Doehlemann, B Ökmen, W Zhu… - The fungal …, 2017 - Wiley Online Library
Fungi have developed a plethora of strategies to colonize plants, and these interactions
result in a broad spectrum of outcomes ranging from beneficial interactions to death of the …

Molecular dialogues between Trichoderma and roots: role of the fungal secretome

A Mendoza-Mendoza, R Zaid, R Lawry… - Fungal Biology …, 2018 - Elsevier
Trichoderma species are opportunistic fungi residing primarily in soil, tree bark and on wild
mushrooms. Trichoderma is capable of killing other fungi and penetrating plant roots, and is …

Genomes and secretomes of Ascomycota fungi reveal diverse functions in plant biomass decomposition and pathogenesis

JF Challacombe, CN Hesse, LM Bramer, LA McCue… - BMC genomics, 2019 - Springer
Background The dominant fungi in arid grasslands and shrublands are members of the
Ascomycota phylum. Ascomycota fungi are important drivers in carbon and nitrogen cycling …

Genome-reconstruction for eukaryotes from complex natural microbial communities

PT West, AJ Probst, IV Grigoriev, BC Thomas… - Genome …, 2018 - genome.cshlp.org
Microbial eukaryotes are integral components of natural microbial communities, and their
inclusion is critical for many ecosystem studies, yet the majority of published metagenome …

Surface frustration re-patterning underlies the structural landscape and evolvability of fungal orphan candidate effectors

MC Derbyshire, S Raffaele - Nature Communications, 2023 - nature.com
Pathogens secrete effector proteins to subvert host physiology and cause disease. Effectors
are engaged in a molecular arms race with the host resulting in conflicting evolutionary …

Quantitative pathogenicity and host adaptation in a fungal plant pathogen revealed by whole-genome sequencing

R Amezrou, A Ducasse, J Compain, N Lapalu… - Nature …, 2024 - nature.com
Abstract Knowledge of genetic determinism and evolutionary dynamics mediating host-
pathogen interactions is essential to manage fungal plant diseases. Studies on the genetic …

The multiple facets of plant–fungal interactions revealed through plant and fungal secretomics

D Vincent, M Rafiqi, D Job - Frontiers in Plant Science, 2020 - frontiersin.org
The plant secretome is usually considered in the frame of proteomics, aiming at
characterizing extracellular proteins, their biological roles and the mechanisms accounting …

Using population and comparative genomics to understand the genetic basis of effector-driven fungal pathogen evolution

C Plissonneau, J Benevenuto… - Frontiers in plant …, 2017 - frontiersin.org
Epidemics caused by fungal plant pathogens pose a major threat to agro-ecosystems and
impact global food security. High-throughput sequencing enabled major advances in …

Verticillium dahliae CFEM proteins manipulate host immunity and differentially contribute to virulence

D Wang, DD Zhang, J Song, JJ Li, J Wang, R Li… - BMC biology, 2022 - Springer
Background Verticillium dahliae is a fungal pathogen that causes a vascular wilt on many
economically important crops. Common fungal extracellular membrane (CFEM) domain …

Gene family expansions and transcriptome signatures uncover fungal adaptations to wood decay

H Hage, S Miyauchi, M Virágh, E Drula… - Environmental …, 2021 - Wiley Online Library
Because they comprise some of the most efficient wood‐decayers, Polyporales fungi impact
carbon cycling in forest environment. Despite continuous discoveries on the enzymatic …