Ribosome biogenesis factors—from names to functions

K Dörner, C Ruggeri, I Zemp, U Kutay - The EMBO journal, 2023 - embopress.org
The assembly of ribosomal subunits is a highly orchestrated process that involves a huge
cohort of accessory factors. Most eukaryotic ribosome biogenesis factors were first identified …

Ribosome Biogenesis in the Yeast Saccharomyces cerevisiae

JL Woolford Jr, SJ Baserga - Genetics, 2013 - academic.oup.com
Ribosomes are highly conserved ribonucleoprotein nanomachines that translate information
in the genome to create the proteome in all cells. In yeast these complex particles contain …

Convolutional networks for supervised mining of molecular patterns within cellular context

I de Teresa-Trueba, SK Goetz, A Mattausch… - Nature …, 2023 - nature.com
Cryo-electron tomograms capture a wealth of structural information on the molecular
constituents of cells and tissues. We present DeePiCt (deep picker in context), an open …

Cryo-EM: a unique tool for the visualization of macromolecular complexity

E Nogales, SHW Scheres - Molecular cell, 2015 - cell.com
3D cryo-electron microscopy (cryo-EM) is an expanding structural biology technique that has
recently undergone a quantum leap progression in its achievable resolution and its …

The structure of the eukaryotic ribosome at 3.0 Å resolution

A Ben-Shem, N Garreau de Loubresse, S Melnikov… - Science, 2011 - science.org
Ribosomes translate genetic information encoded by messenger RNA into proteins. Many
aspects of translation and its regulation are specific to eukaryotes, whose ribosomes are …

Structures of the human and Drosophila 80S ribosome

AM Anger, JP Armache, O Berninghausen, M Habeck… - Nature, 2013 - nature.com
Protein synthesis in all cells is carried out by macromolecular machines called ribosomes.
Although the structures of prokaryotic, yeast and protist ribosomes have been determined …

Mechanisms of integral membrane protein insertion and folding

F Cymer, G Von Heijne, SH White - Journal of molecular biology, 2015 - Elsevier
The biogenesis, folding, and structure of α-helical membrane proteins (MPs) are important to
understand because they underlie virtually all physiological processes in cells including key …

One core, two shells: bacterial and eukaryotic ribosomes

S Melnikov, A Ben-Shem… - Nature structural & …, 2012 - nature.com
Ribosomes are universally conserved enzymes that carry out protein biosynthesis. Bacterial
and eukaryotic ribosomes, which share an evolutionarily conserved core, are thought to …

Functions of ribosomal proteins in assembly of eukaryotic ribosomes in vivo

J de la Cruz, K Karbstein… - Annual review of …, 2015 - annualreviews.org
The proteome of cells is synthesized by ribosomes, complex ribonucleoproteins that in
eukaryotes contain 79–80 proteins and four ribosomal RNAs (rRNAs) more than 5,400 …

[HTML][HTML] Ribosome-mediated specificity in Hox mRNA translation and vertebrate tissue patterning

N Kondrashov, A Pusic, CR Stumpf, K Shimizu… - Cell, 2011 - cell.com
Historically, the ribosome has been viewed as a complex ribozyme with constitutive rather
than regulatory capacity in mRNA translation. Here we identify mutations of the Ribosomal …