Challenges and opportunities for small molecule aptamer development

M McKeague, MC DeRosa - Journal of nucleic acids, 2012 - Wiley Online Library
Aptamers are single‐stranded oligonucleotides that bind to targets with high affinity and
selectivity. Their use as molecular recognition elements has emerged as a viable approach …

Selection and biosensor application of aptamers for small molecules

F Pfeiffer, G Mayer - Frontiers in chemistry, 2016 - frontiersin.org
Small molecules play a major role in the human body and as drugs, toxins, and chemicals.
Tools to detect and quantify them are therefore in high demand. This review will give an …

[HTML][HTML] Aptamers: active targeting ligands for cancer diagnosis and therapy

X Wu, J Chen, M Wu, JX Zhao - Theranostics, 2015 - ncbi.nlm.nih.gov
Aptamers, including DNA, RNA and peptide aptamers, are a group of promising recognition
units that can specifically bind to target molecules and cells. Due to their excellent specificity …

Binary probes for nucleic acid analysis

DM Kolpashchikov - Chemical reviews, 2010 - ACS Publications
Over the last four decades nucleic acid hybridization techniques have been widely used for
the detection of specific nucleic acid sequences. In this approach a 15-nucleotide or longer …

Photonics of trimethine cyanine dyes as probes for biomolecules

PG Pronkin, AS Tatikolov - Molecules, 2022 - mdpi.com
Cyanine dyes are widely used as fluorescent probes in biophysics and medical biochemistry
due to their unique photophysical and photochemical properties (their photonics). This …

Nanomolar fluorescent detection of c-di-GMP using a modular aptamer strategy

S Nakayama, Y Luo, J Zhou, TK Dayie… - Chemical …, 2012 - pubs.rsc.org
C-di-GMP regulates important processes involved in biofilm formation and virulence factors
production in several bacteria. Herein we report a simple fluorescent strategy that allows for …

Recent progress in aptamer‐based functional probes for bioanalysis and biomedicine

H Zhang, L Zhou, Z Zhu, C Yang - Chemistry–A European …, 2016 - Wiley Online Library
Nucleic acid aptamers are short synthetic DNA or RNA sequences that can bind to a wide
range of targets with high affinity and specificity. In recent years, aptamers have attracted …

Aptamers as therapeutic middle molecules

Y Nakamura - Biochimie, 2018 - Elsevier
Therapeutic molecules can be classified as low-, middle-and high-molecular weight drugs
depending on their molecular masses. Antibodies represent high-molecular weight drugs …

RNA plasticity and selectivity applicable to therapeutics and novel biosensor development

Y Nakamura, A Ishiguro, S Miyakawa - Genes to Cells, 2012 - Wiley Online Library
Aptamers are short, single‐stranded nucleic acid sequences that are selected in vitro from
large oligonucleotide libraries based on their high affinity to a target molecule. Hence …

The Runt domain of AML1 (RUNX1) binds a sequence-conserved RNA motif that mimics a DNA element

J Fukunaga, Y Nomura, Y Tanaka, R Amano, T Tanaka… - Rna, 2013 - rnajournal.cshlp.org
AML1 (RUNX1) is a key transcription factor for hematopoiesis that binds to the Runt-binding
double-stranded DNA element (RDE) of target genes through its N-terminal Runt domain …