A user's guide to golden gate cloning methods and standards

JE Bird, J Marles-Wright, A Giachino - ACS Synthetic Biology, 2022 - ACS Publications
The continual demand for specialized molecular cloning techniques that suit a broad range
of applications has driven the development of many different cloning strategies. One method …

Combinatorial metabolic pathway assembly approaches and toolkits for modular assembly

R Young, M Haines, M Storch, PS Freemont - Metabolic Engineering, 2021 - Elsevier
Synthetic Biology is a rapidly growing interdisciplinary field that is primarily built upon
foundational advances in molecular biology combined with engineering design principles …

Golden Standard: a complete standard, portable, and interoperative MoClo tool for model and non-model proteobacteria

B Blázquez, DS León, J Torres-Bacete… - Nucleic Acids …, 2023 - academic.oup.com
Modular cloning has become a benchmark technology in synthetic biology. However, a
notable disparity exists between its remarkable development and the need for …

Comprehensive profiling of four base overhang ligation fidelity by T4 DNA ligase and application to DNA assembly

V Potapov, JL Ong, RB Kucera… - ACS synthetic …, 2018 - ACS Publications
Synthetic biology relies on the manufacture of large and complex DNA constructs from
libraries of genetic parts. Golden Gate and other Type IIS restriction enzyme-dependent …

OPENPichia: licence-free Komagataella phaffii chassis strains and toolkit for protein expression

K Claes, D Van Herpe, R Vanluchene, C Roels… - Nature …, 2024 - nature.com
The industrial yeast Komagataella phaffii (formerly named Pichia pastoris) is commonly
used to synthesize recombinant proteins, many of which are used as human therapeutics or …

A modular two yeast species secretion system for the production and preparative application of unspecific peroxygenases

P Püllmann, A Knorrscheidt, J Münch… - Communications …, 2021 - nature.com
Fungal unspecific peroxygenases (UPOs) represent an enzyme class catalysing versatile
oxyfunctionalisation reactions on a broad substrate scope. They are occurring as secreted …

[HTML][HTML] The evolving art of creating genetic diversity: From directed evolution to synthetic biology

A Currin, S Parker, CJ Robinson, E Takano… - Biotechnology …, 2021 - Elsevier
The ability to engineer biological systems, whether to introduce novel functionality or
improved performance, is a cornerstone of biotechnology and synthetic biology. Typically …

Golden Mutagenesis: An efficient multi-site-saturation mutagenesis approach by Golden Gate cloning with automated primer design

P Püllmann, C Ulpinnis, S Marillonnet, R Gruetzner… - Scientific reports, 2019 - nature.com
Site-directed methods for the generation of genetic diversity are essential tools in the field of
directed enzyme evolution. The Golden Gate cloning technique has been proven to be an …

GOLDBAR: A Framework for Combinatorial Biological Design

N Roehner, J Roberts, A Lapets, D Gould… - ACS Synthetic …, 2024 - ACS Publications
With the rise of new DNA part libraries and technologies for assembling DNA, synthetic
biologists are increasingly constructing and screening combinatorial libraries to optimize …

Mobius assembly for plant systems highlights promoter-terminator interaction in gene regulation

AI Andreou, J Nirkko, M Ochoa-Villarreal, N Nakayama - bioRxiv, 2021 - biorxiv.org
Plant synthetic biology is a fast-evolving field that employs engineering principles to
empower research and bioproduction in plant systems. Nevertheless, in the whole synthetic …