Graph-based data clustering via multiscale community detection

Z Liu, M Barahona - Applied Network Science, 2020 - Springer
We present a graph-theoretical approach to data clustering, which combines the creation of
a graph from the data with Markov Stability, a multiscale community detection framework. We …

Unfolding the multiscale structure of networks with dynamical Ollivier-Ricci curvature

A Gosztolai, A Arnaudon - Nature Communications, 2021 - nature.com
Describing networks geometrically through low-dimensional latent metric spaces has helped
design efficient learning algorithms, unveil network symmetries and study dynamical …

Overlapping community detection on complex networks with Graph Convolutional Networks

S Yuan, H Zeng, Z Zuo, C Wang - Computer Communications, 2023 - Elsevier
Discovering the community structure within networks is of significance with respect to many
realistic applications, like recommendation systems and cyberattack detection. In this study …

Data-driven unsupervised clustering of online learner behaviour

RL Peach, SN Yaliraki, D Lefevre… - npj Science of Learning, 2019 - nature.com
The widespread adoption of online courses opens opportunities for analysing learner
behaviour and optimising web-based learning adapted to observed usage. Here, we …

Toward precision healthcare: context and mathematical challenges

C Colijn, N Jones, IG Johnston, S Yaliraki… - Frontiers in …, 2017 - frontiersin.org
Precision medicine refers to the idea of delivering the right treatment to the right patient at
the right time, usually with a focus on a data-centered approach to this task. In this …

Flow-Based Network Analysis of the Caenorhabditis elegans Connectome

KA Bacik, MT Schaub, M Beguerisse-Díaz… - PLoS computational …, 2016 - journals.plos.org
We exploit flow propagation on the directed neuronal network of the nematode C. elegans to
reveal dynamically relevant features of its connectome. We find flow-based groupings of …

From free text to clusters of content in health records: an unsupervised graph partitioning approach

MT Altuncu, E Mayer, SN Yaliraki, M Barahona - Applied network science, 2019 - Springer
Electronic healthcare records contain large volumes of unstructured data in different forms.
Free text constitutes a large portion of such data, yet this source of richly detailed information …

Community detection with graph neural network using Markov stability

S Yuan, C Wang, Q Jiang, J Ma - … International Conference on …, 2022 - ieeexplore.ieee.org
Community detection is a fundamental task in network analysis. With the recent
development of deep learning, some community detection methods related to deep learning …

New geographic model of care to manage the post-COVID-19 elective surgery aftershock in England: a retrospective observational study

J Clarke, A Murray, SR Markar, M Barahona… - BMJ open, 2020 - bmjopen.bmj.com
Objectives The suspension of elective surgery during the COVID-19 pandemic is
unprecedented and has resulted in record volumes of patients waiting for operations. Novel …

Functional module detection through integration of single-cell RNA sequencing data with protein–protein interaction networks

F Klimm, EM Toledo, T Monfeuga, F Zhang, CM Deane… - BMC genomics, 2020 - Springer
Background Recent advances in single-cell RNA sequencing have allowed researchers to
explore transcriptional function at a cellular level. In particular, single-cell RNA sequencing …