Integration, disintegration, and self-similarity: characterizing the scales of shape variation in landmark data

FL Bookstein - Evolutionary biology, 2015 - Springer
The biologist examining samples of multicellular organisms in anatomical detail must
already have an intuitive concept of morphological integration. But quantifying that intuition …

Spectral log-demons: diffeomorphic image registration with very large deformations

H Lombaert, L Grady, X Pennec, N Ayache… - International journal of …, 2014 - Springer
This paper presents a new framework for capturing large and complex deformations in
image registration and atlas construction. This challenging and recurrent problem in …

A visual analytics perspective on shape analysis: State of the art and future prospects

M Hermann, R Klein - Computers & Graphics, 2015 - Elsevier
The combination of long established techniques in morphometrics with novel shape
modeling approaches in geometry processing has opened new ways of visualizations of …

Planning of mandibular reconstructions based on statistical shape models

S Raith, S Wolff, T Steiner, A Modabber… - International Journal of …, 2017 - Springer
Purpose The reconstruction of large continuity defects of the mandible is a challenging task,
especially when the shape of the missing part is not known prior to operation. Today, the …

Spatio-temporal tensor decomposition of a polyaffine motion model for a better analysis of pathological left ventricular dynamics

K McLeod, M Sermesant, P Beerbaum… - IEEE transactions on …, 2015 - ieeexplore.ieee.org
Given that heart disease can cause abnormal motion dynamics over the cardiac cycle,
understanding and quantifying cardiac motion can provide insight for clinicians to aid with …

Automated planning with multivariate shape descriptors for fibular transfer in mandibular reconstruction

M Nakao, S Aso, Y Imai, N Ueda… - IEEE transactions on …, 2016 - ieeexplore.ieee.org
Objective: This paper introduces methods to automate preoperative planning of fibular
segmentation and placement for mandibular reconstruction with fibular flaps. Methods …

A sub-riemannian modular framework for diffeomorphism-based analysis of shape ensembles

B Gris, S Durrleman, A Trouvé - SIAM Journal on Imaging Sciences, 2018 - SIAM
Deformations, and diffeormophisms, in particular, have played a tremendous role in the field
of statistical shape analysis, as a proxy to measure and interpret differences between similar …

Indirect image registration with large diffeomorphic deformations

C Chen, O Oktem - SIAM Journal on Imaging Sciences, 2018 - SIAM
This paper adapts the large deformation diffeomorphic metric mapping framework for image
registration to the indirect setting, where a template is registered against a target that is …

In vivo ankle joint kinematics from dynamic magnetic resonance imaging using a registration-based framework

K Makki, B Borotikar, M Garetier, S Brochard… - Journal of …, 2019 - Elsevier
In this paper, we propose a method for non-invasively measuring three-dimensional in vivo
kinematics of the ankle joint from a dynamic MRI acquisition of a single range-of-motion …

Image-based vs. mesh-based statistical appearance models of the human femur: implications for finite element simulations

S Bonaretti, C Seiler, C Boichon, M Reyes… - Medical engineering & …, 2014 - Elsevier
Statistical appearance models have recently been introduced in bone mechanics to
investigate bone geometry and mechanical properties in population studies. The …