Transcriptome analysis of maize pathogen Fusarium verticillioides revealed FvLcp1, a secreted protein with type-D fungal LysM and chitin-binding domains, that plays …

H Zhang, MS Kim, J Huang, H Yan, T Yang… - Microbiological …, 2022 - Elsevier
Fusarium verticillioides is a key maize pathogen and produces fumonisins, a group of
mycotoxins detrimental to humans and animals. Unfortunately, our understanding on how …

Dynamic network inference and association computation discover gene modules regulating virulence, mycotoxin and sexual reproduction in Fusarium graminearum

L Guo, M Ji, K Ye - BMC genomics, 2020 - Springer
Abstract Background The filamentous fungus Fusarium graminearum causes devastating
crop diseases and produces harmful mycotoxins worldwide. Understanding the complex F …

Characterizing co-expression networks underpinning maize stalk rot virulence in Fusarium verticillioides through computational subnetwork module analyses

MS Kim, H Zhang, H Yan, BJ Yoon, WB Shim - Scientific Reports, 2018 - nature.com
Fusarium verticillioides is recognized as an important stalk rot pathogen of maize worldwide,
but our knowledge of genetic mechanisms underpinning this pathosystem is limited …

Computational identification of genetic subnetwork modules associated with maize defense response to Fusarium verticillioides

M Kim, H Zhang, C Woloshuk, WB Shim, BJ Yoon - BMC bioinformatics, 2015 - Springer
Background Maize, a crop of global significance, is vulnerable to a variety of biotic stresses
resulting in economic losses. Fusarium verticillioides (teleomorph Gibberella moniliformis) is …

PHI-Nets: A network resource for Ascomycete fungal pathogens to annotate and identify putative virulence interacting proteins and siRNA targets

EI Janowska-Sejda, A Lysenko, M Urban… - Frontiers in …, 2019 - frontiersin.org
Interactions between proteins underlie all aspects of complex biological mechanisms.
Therefore, methodologies based on complex network analyses can facilitate identification of …

Fusarium verticillioides SNARE protein FvSyn1 harbours two key functional motifs that play selective roles in fungal development and virulence

H Zhang, H Yan, WB Shim - Microbiology, 2019 - microbiologyresearch.org
Fusarium verticillioides is one of the key fungal pathogens responsible for maize stalk rot.
While stalk rot pathogens are prevalent worldwide, our understanding of the stalk rot …

Application of game theory to explore the dynamics of host− pathogen association in phytobiomes

MS Kim, H Zhang, WB Shim - Phytobiomes, 2018 - Am Phytopath Society
Recent advances in sequencing technology and big data analytics are moving plant
pathology into a new era where we are now pursuing a deeper systems-level understanding …

FvLcp1, a type-D fungal LysM protein with Chitin-binding domains, is a secreted protein involved in host recognition and fumonisin production in Fusarium …

H Zhang, MS Kim, J Huang, H Yan, T Yang, L Song… - BioRxiv, 2019 - biorxiv.org
Fusarium verticillioides is one of the key maize ear rot pathogens and produces fumonisins,
a group of mycotoxins detrimental to humans and animals. Unfortunately, our understanding …

Modularized Transcriptional Regulatory Networks of Fusarium graminearum

L Guo, M Ji, K Ye - bioRxiv, 2019 - biorxiv.org
The filamentous fungus Fusarium graminearum causes devastating crop disease and
produces harmful mycotoxins worldwide. Understanding F. graminearum transcriptional …

[引用][C] Computational Identification of Functional Modules and Hub Genes Involved in Pathogenicity-Associated or Defense Response on Fusarium Verticillioides …

M Kim - 2016