[HTML][HTML] Expanding ecological assessment by integrating microorganisms into routine freshwater biomonitoring

M Sagova-Mareckova, J Boenigk, A Bouchez… - Water research, 2021 - Elsevier
Bioindication has become an indispensable part of water quality monitoring in most
countries of the world, with the presence and abundance of bioindicator taxa, mostly …

Marine fungi: their ecology and molecular diversity

TA Richards, MDM Jones, G Leonard… - Annual review of …, 2012 - annualreviews.org
Fungi appear to be rare in marine environments. There are relatively few marine isolates in
culture, and fungal small subunit ribosomal DNA (SSU rDNA) sequences are rarely …

Characterization of the 18S rRNA gene for designing universal eukaryote specific primers

K Hadziavdic, K Lekang, A Lanzen, I Jonassen… - PloS one, 2014 - journals.plos.org
High throughput sequencing technology has great promise for biodiversity studies.
However, an underlying assumption is that the primers used in these studies are universal …

Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water

T Stoeck, D Bass, M Nebel, R Christen… - Molecular …, 2010 - Wiley Online Library
Sequencing of ribosomal DNA clone libraries amplified from environmental DNA has
revolutionized our understanding of microbial eukaryote diversity and ecology. The results of …

Diversity and temporal patterns of planktonic protist assemblages at a Mediterranean Long Term Ecological Research site

R Piredda, MP Tomasino, AM D'erchia… - FEMS microbiology …, 2017 - academic.oup.com
We tracked temporal changes in protist diversity at the Long Term Ecological Research
(LTER) station MareChiara in the Gulf of Naples (Mediterranean Sea) on eight dates in 2011 …

[图书][B] Fungi in coastal and oceanic marine ecosystems

S Raghukumar - 2017 - Springer
Mycologists have been fascinated with marine fungi for more than 70 years now. An
enormous volume of information on marine fungi is presently available. We can now say …

Diversity in a hidden world: potential and limitation of next‐generation sequencing for surveys of molecular diversity of eukaryotic microorganisms

R Medinger, V Nolte, RV Pandey, S Jost… - Molecular …, 2010 - Wiley Online Library
With the delivery of millions of sequence reads in a single experiment, next‐generation
sequencing (NGS) is currently revolutionizing surveys of microorganism diversity. In …

The diversity of small eukaryotic phytoplankton (≤ 3 μm) in marine ecosystems

D Vaulot, W Eikrem, M Viprey… - FEMS microbiology …, 2008 - academic.oup.com
Small cells dominate photosynthetic biomass and primary production in many marine
ecosystems. Traditionally, picoplankton refers to cells≤ 2 μm. Here we extend the size …

[图书][B] The fungal community: its organization and role in the ecosystem

J Dighton, JF White - 2017 - taylorfrancis.com
"… a number of chapters provide excellent summaries of the modern methods available for
studying fungal ecology, along with those more traditional methods that are still extremely …

Yeast forms dominate fungal diversity in the deep oceans

D Bass, A Howe, N Brown, H Barton… - … of the Royal …, 2007 - royalsocietypublishing.org
Fungi are the principal degraders of biomass in most terrestrial ecosystems. In contrast to
surface environments, deep-sea environmental gene libraries have suggested that fungi are …