Machines that learn to segment images: a crucial technology for connectomics

V Jain, HS Seung, SC Turaga - Current opinion in neurobiology, 2010 - Elsevier
Connections between neurons can be found by checking whether synapses exist at points
of contact, which in turn are determined by neural shapes. Finding these shapes is a special …

[图书][B] Geometric partial differential equations and image analysis

G Sapiro - 2006 - books.google.com
This book provides an introduction to the use of geometric partial differential equations in
image processing and computer vision. This research area brings a number of new …

[图书][B] Handbook of numerical analysis

PG Ciarlet, JL Lions - 2002 - books.google.com
Page 1 HANDBOOK of NUMERICAL ANALYSIS PG CIARLET and JL LIONS • Editors Volume
VIII Solution of Equations in R" (Part 4) Techniques of Scientific Computing (Part 4) Numerical …

Neuronal tracing for connectomic studies

J Lu - Neuroinformatics, 2011 - Springer
Reconstruction of the complete wiring diagram, or connectome, of a neural circuit provides
an alternative approach to conventional circuit analysis. One major obstacle of …

Morphing active contours

M Bertalmio, G Sapiro, G Randall - IEEE Transactions on …, 2000 - ieeexplore.ieee.org
A method for deforming curves in a given image to a desired position in a second image is
introduced. The algorithm is based on deforming the first image toward the second one via a …

Segmenting skin lesions with partial-differential-equations-based image processing algorithms

DH Chung, G Sapiro - IEEE transactions on Medical Imaging, 2000 - ieeexplore.ieee.org
A partial-differential equations (PDE)-based system for detecting the boundary of skin
lesions in digital clinical skin images is presented. The image is first preprocessed via …

Detection of neuron membranes in electron microscopy images using a serial neural network architecture

E Jurrus, ARC Paiva, S Watanabe, JR Anderson… - Medical image …, 2010 - Elsevier
Study of nervous systems via the connectome, the map of connectivities of all neurons in that
system, is a challenging problem in neuroscience. Towards this goal, neurobiologists are …

Axon tracking in serial block-face scanning electron microscopy

E Jurrus, M Hardy, T Tasdizen, PT Fletcher… - Medical image …, 2009 - Elsevier
Electron microscopy is an important modality for the analysis of neuronal structures in
neurobiology. We address the problem of tracking axons across large distances in volumes …

Morphological segmentation of histology cell images

A Nedzved, S Ablameyko, I Pitas - … International Conference on …, 2000 - ieeexplore.ieee.org
Two algorithms for segmentation of cell images are proposed. They have a unique part that
contains computation of morphological gradient to extract object borders and thinning the …

Automation of 3D reconstruction of neural tissue from large volume of conventional serial section transmission electron micrographs

Y Mishchenko - Journal of neuroscience methods, 2009 - Elsevier
We describe an approach for automation of the process of reconstruction of neural tissue
from serial section transmission electron micrographs. Such reconstructions require 3D …