Computational modeling of realistic cell membranes

SJ Marrink, V Corradi, PCT Souza, HI Ingolfsson… - Chemical …, 2019 - ACS Publications
Cell membranes contain a large variety of lipid types and are crowded with proteins,
endowing them with the plasticity needed to fulfill their key roles in cell functioning. The …

Multifaceted computational modeling in glycoscience

S Perez, O Makshakova - Chemical Reviews, 2022 - ACS Publications
Glycoscience assembles all the scientific disciplines involved in studying various molecules
and macromolecules containing carbohydrates and complex glycans. Such an ensemble …

Characterization of lipid–protein interactions and lipid-mediated modulation of membrane protein function through molecular simulation

MP Muller, T Jiang, C Sun, M Lihan, S Pant… - Chemical …, 2019 - ACS Publications
The cellular membrane constitutes one of the most fundamental compartments of a living
cell, where key processes such as selective transport of material and exchange of …

Bacterial glycosyltransferases: challenges and opportunities of a highly diverse enzyme class toward tailoring natural products

J Schmid, D Heider, NJ Wendel, N Sperl… - Frontiers in …, 2016 - frontiersin.org
The enzyme subclass of glycosyltransferases (GTs; EC 2.4) currently comprises 97 families
as specified by CAZy classification. One of their important roles is in the biosynthesis of …

[HTML][HTML] Microbial expression systems for membrane proteins

MV Dilworth, MS Piel, KE Bettaney, P Ma, J Luo… - Methods, 2018 - Elsevier
Despite many high-profile successes, recombinant membrane protein production remains a
technical challenge; it is still the case that many fewer membrane protein structures have …

Protein amphipathic helix insertion: A mechanism to induce membrane fission

MA Zhukovsky, A Filograna, A Luini, D Corda… - Frontiers in cell and …, 2019 - frontiersin.org
One of the fundamental features of biomembranes is the ability to fuse or to separate. These
processes called respectively membrane fusion and fission are central in the homeostasis of …

Extension of cell membrane boosting squalene production in the engineered Escherichia coli

Y Meng, X Shao, Y Wang, Y Li, X Zheng… - Biotechnology and …, 2020 - Wiley Online Library
Squalene is a lipophilic and non‐volatile triterpene with many industrial applications for
food, pharmaceuticals, and cosmetics. Metabolic engineering focused on optimization of the …

Curvature sensing by cardiolipin in simulated buckled membranes

F Elías-Wolff, M Lindén, AP Lyubartsev, EG Brandt - Soft Matter, 2019 - pubs.rsc.org
Cardiolipin is a non-bilayer phospholipid with a unique dimeric structure. It localizes to
negative curvature regions in bacteria and is believed to stabilize respiratory chain …

Anisotropic membrane curvature sensing by amphipathic peptides

J Gómez-Llobregat, F Elías-Wolff, M Lindén - Biophysical journal, 2016 - cell.com
Many proteins and peptides have an intrinsic capacity to sense and induce membrane
curvature, and play crucial roles for organizing and remodeling cell membranes. However …

A vesicle-to-sponge transition via the proliferation of membrane-linking pores in ω-3 polyunsaturated fatty acid-containing lipid assemblies

A Angelova, B Angelov, VM Garamus… - Journal of Molecular …, 2019 - Elsevier
We investigate the nanostructure evolution and the membrane reorganization of diluted lipid
dispersions of self-assembled monoolein (MO)/eicosapentaenoic acid (EPA, 20: 5) mixtures …