A Csikasz-Nagy - Briefings in bioinformatics, 2009 - academic.oup.com
One of the early success stories of computational systems biology was the work done on cell- cycle regulation. The earliest mathematical descriptions of cell-cycle control evolved into …
K Iwamoto, H Hamada, Y Eguchi, M Okamoto - Biosystems, 2011 - Elsevier
After DNA damage, cells activate p53, a tumor suppressor gene, and select a cell fate (eg, DNA repair, cell cycle arrest, or apoptosis). Recently, a p53 oscillatory behavior was …
Dynamical modelling is at the core of the systems biology paradigm. However, the development of comprehensive quantitative models is complicated by the daunting …
Background Parametric sensitivity analysis (PSA) has become one of the most commonly used tools in computational systems biology, in which the sensitivity coefficients are used to …
Background The cell cycle is a complex process that allows eukaryotic cells to replicate chromosomal DNA and partition it into two daughter cells. A relevant regulatory step is in the …
HS Khalil, H Tummala, N Zhelev - Biodiscovery, 2012 - biodiscovery.pensoft.net
The ability of a cell to conserve and maintain its native DNA sequence is fundamental for the survival and normal functioning of the whole organism and protection from cancer …
A Abroudi, S Samarasinghe, D Kulasiri - Journal of theoretical biology, 2017 - Elsevier
Not many models of mammalian cell cycle system exist due to its complexity. Some models are too complex and hard to understand, while some others are too simple and not …
Many complex kinetic models in the field of biochemical reactions contain a large number of species and reactions. These models often require a huge array of computational tools to …
H Ling, D Kulasiri, S Samarasinghe - Biosystems, 2010 - Elsevier
We investigate the robustness and the behaviours of the critical proteins under parameter perturbations of G1/S checkpoint pathways with different levels of DNA-damage, based on a …