Pan-genome is defined as the set of orthologous and unique genes of a specific group of
organisms. The pan-genome is composed by the core genome, accessory genome, and …

Plants live in association with microorganisms that positively influence plant development,
vigor, and fitness in response to pathogens and abiotic stressors. The bulk of the plant …

The sea represents a major source of biodiversity. It exhibits many different ecosystems in a
huge variety of environmental conditions where marine organisms have evolved with …

Large-scale mining and analysis of bacterial datasets contribute to the comprehensive
characterization of complex microbial dynamics within a microbiome and among different …

Pan‐genomics is one of the most powerful means to study genomic variation and obtain a
sketch of genes within a defined clade of species. Though there are a lot of computational …

Motivation As pan-genome approaches are largely employed for bacterial comparative
genomics and evolution analyses, but still difficult to be carried out by non-bioinformatician …

Sphingomonas paucimobilis ZJSH1 is an endophytic bacterium isolated from the roots of
Dendrobium officinale with the ability to promote plant growth. It was found that the genome …

Edwardsiella tarda is a Gram-negative, facultative anaerobic rod-shaped bacterium and the
causative agent of the systemic disease “Edwardsiellosis”. It is commonly prevalent in …

Thanks to the progress and decreasing costs in genome sequencing technologies, more
than 250,000 bacterial genomes are currently available in public databases, covering most …

Staphylococcus caprae, Staphylococcus capitis, and Staphylococcus epidermidis belong to
the “Epidermidis Cluster Group”(ECG) and are generally opportunistic pathogens. In this …