Escherichia coli as a host for metabolic engineering

S Pontrelli, TY Chiu, EI Lan, FYH Chen, P Chang… - Metabolic …, 2018 - Elsevier
Over the past century, Escherichia coli has become one of the best studied organisms on
earth. Features such as genetic tractability, favorable growth conditions, well characterized …

Large-scale production of enzymes for biotechnology uses

A Fasim, VS More, SS More - Current opinion in biotechnology, 2021 - Elsevier
Enzymes are biocatalysts that speed up the chemical reaction to obtain the final valuable
product/s. Biotechnology has revolutionized the use of traditional enzymes to be applicable …

BacPROTACs mediate targeted protein degradation in bacteria

FE Morreale, S Kleine, J Leodolter, S Junker, DM Hoi… - Cell, 2022 - cell.com
Hijacking the cellular protein degradation system offers unique opportunities for drug
discovery, as exemplified by proteolysis-targeting chimeras. Despite their great promise for …

CRISPR-Cas-based antimicrobials: design, challenges, and bacterial mechanisms of resistance

A Mayorga-Ramos, J Zúñiga-Miranda… - ACS Infectious …, 2023 - ACS Publications
The emergence of antibiotic-resistant bacterial strains is a source of public health concern
across the globe. As the discovery of new conventional antibiotics has stalled significantly …

Approaches to genetic tool development for rapid domestication of non-model microorganisms

LA Riley, AM Guss - Biotechnology for Biofuels, 2021 - Springer
Non-model microorganisms often possess complex phenotypes that could be important for
the future of biofuel and chemical production. They have received significant interest the last …

Towards next-generation cell factories by rational genome-scale engineering

S Yilmaz, A Nyerges, J van der Oost, GM Church… - Nature Catalysis, 2022 - nature.com
Metabolic engineering holds the promise to transform the chemical industry and to support
the transition into a circular bioeconomy, by engineering cellular biocatalysts that efficiently …

[HTML][HTML] A navigation guide of synthetic biology tools for Pseudomonas putida

M Martin-Pascual, C Batianis, L Bruinsma… - Biotechnology …, 2021 - Elsevier
Pseudomonas putida is a microbial chassis of huge potential for industrial and
environmental biotechnology, owing to its remarkable metabolic versatility and ability to …

Synthetic genetic circuits for programmable biological functionalities

PF Xia, H Ling, JL Foo, MW Chang - Biotechnology advances, 2019 - Elsevier
Living organisms evolve complex genetic networks to interact with the environment. Due to
the rapid development of synthetic biology, various modularized genetic parts and units …

A critical review of genome editing and synthetic biology applications in metabolic engineering of microalgae and cyanobacteria

IS Ng, BB Keskin, SI Tan - Biotechnology Journal, 2020 - Wiley Online Library
Being the green gold of the future, microalgae and cyanobacteria have recently attracted
considerable interest worldwide, for their metabolites such as lipids, protein, pigments, and …

Improved prediction of bacterial CRISPRi guide efficiency from depletion screens through mixed-effect machine learning and data integration

Y Yu, S Gawlitt, LB de Andrade e Sousa, E Merdivan… - Genome Biology, 2024 - Springer
CRISPR interference (CRISPRi) is the leading technique to silence gene expression in
bacteria; however, design rules remain poorly defined. We develop a best-in-class …