The largest monkeypox virus (MPXV) outbreak described so far in non-endemic countries
was identified in May 2022 (refs.,,,,–). In this study, shotgun metagenomics allowed the rapid …

Pathogen genome sequencing during epidemics enhances our ability to identify and
understand suspected clusters and investigate their relationships. Here, we combine …

Background and objectives To understand how organisms evolve, it is fundamental to study
how mutations emerge and establish. Here, we estimated the rate of mutation accumulation …

In August 2023, six locally acquired dengue virus 1 infections were detected in Lodi
province, Lombardy Region, in northern Italy, where the vector Aedes albopictus is present …

Background With the gradual reopening of economies and resumption of social life, robust
surveillance mechanisms should be implemented to control the ongoing COVID-19 …

Recent studies have shown that persistent SARS-CoV-2 infections in immunocompromised
patients can trigger the accumulation of an unusual high number of mutations with potential …

Dissemination of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in
healthcare institutions affects both patients and health-care workers (HCW), as well as the …

We have adopted an open bioinformatics ecosystem to address the challenges of
bioinformatics implementation in public health laboratories (PHLs). Bioinformatics …

The recent monkeypox virus (MPXV) outbreak was of global concern and has mainly
affected gay, bisexual and other men who have sex with men (GBMSM). Here we assess …

Echovirus 11 (E11) has recently been associated with a series of nine neonatal cases of
severe hepatitis in France. Here, we present severe hepatitis caused by E11 in a pair of …