[HTML][HTML] The scientific case for brain simulations

GT Einevoll, A Destexhe, M Diesmann, S Grün, V Jirsa… - Neuron, 2019 - cell.com
A key element of the European Union's Human Brain Project (HBP) and other large-scale
brain research projects is the simulation of large-scale model networks of neurons. Here, we …

SpikeInterface, a unified framework for spike sorting

AP Buccino, CL Hurwitz, S Garcia, J Magland… - Elife, 2020 - elifesciences.org
Much development has been directed toward improving the performance and automation of
spike sorting. This continuous development, while essential, has contributed to an over …

Multimodal modeling of neural network activity: computing LFP, ECoG, EEG, and MEG signals with LFPy 2.0

E Hagen, S Næss, TV Ness… - Frontiers in …, 2018 - frontiersin.org
Recordings of extracellular electrical, and later also magnetic, brain signals have been the
dominant technique for measuring brain activity for decades. The interpretation of such …

SpikeForest, reproducible web-facing ground-truth validation of automated neural spike sorters

J Magland, JJ Jun, E Lovero, AJ Morley, CL Hurwitz… - Elife, 2020 - elifesciences.org
Spike sorting is a crucial step in electrophysiological studies of neuronal activity. While many
spike sorting packages are available, there is little consensus about which are most …

Massively parallel recordings in macaque motor cortex during an instructed delayed reach-to-grasp task

T Brochier, L Zehl, Y Hao, M Duret, J Sprenger… - Scientific data, 2018 - nature.com
We publish two electrophysiological datasets recorded in motor cortex of two macaque
monkeys during an instructed delayed reach-to-grasp task, using chronically implanted 10 …

Modelling and analysis of electrical potentials recorded in microelectrode arrays (MEAs)

TV Ness, C Chintaluri, J Potworowski, S Łęski… - Neuroinformatics, 2015 - Springer
Abstract Microelectrode arrays (MEAs), substrate-integrated planar arrays of up to
thousands of closely spaced metal electrode contacts, have long been used to record …

[图书][B] Electric brain signals: foundations and applications of biophysical modeling

G Halnes, TV Ness, S Næss, E Hagen, KH Pettersen… - 2024 - books.google.com
It is common to study the electric activity of neurons by measuring the electric potential in the
extracellular space of the brain. However, interpreting such measurements requires …

[HTML][HTML] ViSAPy: a Python tool for biophysics-based generation of virtual spiking activity for evaluation of spike-sorting algorithms

E Hagen, TV Ness, A Khosrowshahi… - Journal of neuroscience …, 2015 - Elsevier
Background New, silicon-based multielectrodes comprising hundreds or more electrode
contacts offer the possibility to record spike trains from thousands of neurons …

Computing extracellular electric potentials from neuronal simulations

TV Ness, G Halnes, S Næss, KH Pettersen… - … Modelling of the Brain …, 2021 - Springer
Measurements of electric potentials from neural activity have played a key role in
neuroscience for almost a century, and simulations of neural activity is an important tool for …

Designing workflows for the reproducible analysis of electrophysiological data

M Denker, S Grün - … Workshop, BrainComp 2015, Cetraro, Italy, July 6-10 …, 2016 - Springer
The workflows that cover the experimental recording of neuronal data up to the publication
of figures that illustrate neuroscientific analysis results are interwoven and complex …