Reviewing mathematical models of sperm signaling networks

D Priego Espinosa, J Espinal‐Enríquez… - Molecular …, 2024 - Wiley Online Library
Dave Garbers' work significantly contributed to our understanding of sperm's regulated
motility, capacitation, and the acrosome reaction. These key sperm functions involve …

[HTML][HTML] Moving beyond Vesalius: why anatomy needs a mapping update

G Scarr, L Blyum, SM Levin, SL de Solórzano - Medical Hypotheses, 2024 - Elsevier
The improvement of the human condition is the driver behind a vast amount of ongoing
research and naturally employs the most up-to-date methods in its endeavours. It has …

Time-correlation functions of stochastic three-sphere micromachines

J Li, Z Zhang, Z Hou, K Yasuda, L He, S Komura - Physical Review E, 2024 - APS
We discuss and compare the statistical properties of two stochastic three-sphere
micromachines, ie, odd micromachine and thermal micromachine. We calculate the steady …

Emergence of odd elasticity in a microswimmer using deep reinforcement learning

LS Lin, K Yasuda, K Ishimoto, S Komura - Physical Review Research, 2024 - APS
We use the Deep Q-Network with reinforcement learning to investigate the emergence of
odd elasticity in an elastic microswimmer model. For an elastic microswimmer, it is …

Entropy change due to stochastic state transitions of odd Langevin system

K Yasuda - arXiv preprint arXiv:2312.14469, 2023 - arxiv.org
Active microscopic objects, eg, an enzyme molecule, are modeled by the odd Langevin
system, in which energy injection from the substrate to the enzyme is described by the …

Interplay between local and global order controls bifurcations in nonreciprocal systems without a conservation law

K Blom, U Thiele, A Godec - arXiv preprint arXiv:2407.20312, 2024 - arxiv.org
We elucidate the generic bifurcation behavior of local and global order in the short-range
interacting nonreciprocal Ising model evolving under Glauber dynamics. We show that a …

Irreversibility of stochastic state transitions in Langevin systems with odd elasticity

K Yasuda - Physical Review E, 2024 - APS
Active microscopic objects, such as an enzyme molecule, are modeled by the Langevin
system with the odd elasticity, in which energy injection from the substrate to the enzyme is …

Reciprocal microswimming in fluctuating and confined environments

Y Hiruta, K Ishimoto - Physical Review Research, 2024 - APS
From bacteria and sperm cells to artificial microrobots, self-propelled microscopic objects at
low Reynolds numbers often perceive fluctuating mechanical and chemical stimuli and …

Odd elasticity in driven granular matter

R Huang, R Mandal, C Scheibner, V Vitelli - arXiv preprint arXiv …, 2023 - arxiv.org
Odd elasticity describes the unusual elastic response of solids whose stress-strain
relationship is not compatible with an elastic potential. Here, we present a study of odd …

Rigid flocks, undulatory gaits, and chiral foldamers in a chemically active polymer

AG Subramaniam, M Kumar, S Thutupalli… - New Journal of …, 2024 - iopscience.iop.org
Active matter systems—such as a collection of active colloidal particles—operate far from
equilibrium with complex inter-particle interactions that govern their collective dynamics …