Circadian clocks in the immune system

N Labrecque, N Cermakian - Journal of biological rhythms, 2015 - journals.sagepub.com
The immune system is a complex set of physiological mechanisms whose general aim is to
defend the organism against non-self-bodies, such as pathogens (bacteria, viruses …

Metabolism and the circadian clock converge

K Eckel-Mahan, P Sassone-Corsi - Physiological reviews, 2013 - journals.physiology.org
Circadian rhythms occur in almost all species and control vital aspects of our physiology,
from sleeping and waking to neurotransmitter secretion and cellular metabolism …

The human and mouse enteric nervous system at single-cell resolution

E Drokhlyansky, CS Smillie, N Van Wittenberghe… - Cell, 2020 - cell.com
The enteric nervous system (ENS) coordinates diverse functions in the intestine but has
eluded comprehensive molecular characterization because of the rarity and diversity of …

Spatiotemporal single-cell analysis of gene expression in the mouse suprachiasmatic nucleus

S Wen, D Ma, M Zhao, L Xie, Q Wu, L Gou, C Zhu… - Nature …, 2020 - nature.com
Mammalian circadian behaviors are orchestrated by the suprachiasmatic nucleus (SCN) in
the ventral hypothalamus, but the number of SCN cell types and their functional roles remain …

Insulin/IGF-1 drives PERIOD synthesis to entrain circadian rhythms with feeding time

P Crosby, R Hamnett, M Putker, NP Hoyle, M Reed… - Cell, 2019 - cell.com
In mammals, endogenous circadian clocks sense and respond to daily feeding and lighting
cues, adjusting internal∼ 24 h rhythms to resonate with, and anticipate, external cycles of …

Circadian patterns of gene expression in the human brain and disruption in major depressive disorder

JZ Li, BG Bunney, F Meng… - Proceedings of the …, 2013 - National Acad Sciences
A cardinal symptom of major depressive disorder (MDD) is the disruption of circadian
patterns. However, to date, there is no direct evidence of circadian clock dysregulation in the …

Effects of insufficient sleep on circadian rhythmicity and expression amplitude of the human blood transcriptome

CS Möller-Levet, SN Archer, G Bucca… - Proceedings of the …, 2013 - National Acad Sciences
Insufficient sleep and circadian rhythm disruption are associated with negative health
outcomes, including obesity, cardiovascular disease, and cognitive impairment, but the …

Suprachiasmatic nucleus: cell autonomy and network properties

DK Welsh, JS Takahashi, SA Kay - Annual review of physiology, 2010 - annualreviews.org
The suprachiasmatic nucleus (SCN) is the primary circadian pacemaker in mammals.
Individual SCN neurons in dispersed culture can generate independent circadian …

[HTML][HTML] Muscle insulin sensitivity and glucose metabolism are controlled by the intrinsic muscle clock

KA Dyar, S Ciciliot, LE Wright, RS Biensø… - Molecular …, 2014 - Elsevier
Circadian rhythms control metabolism and energy homeostasis, but the role of the skeletal
muscle clock has never been explored. We generated conditional and inducible mouse …

Comparison of co-expression measures: mutual information, correlation, and model based indices

L Song, P Langfelder, S Horvath - BMC bioinformatics, 2012 - Springer
Background Co-expression measures are often used to define networks among genes.
Mutual information (MI) is often used as a generalized correlation measure. It is not clear …