eDNA metabarcoding reveals differences in fish diversity and community structure in Danjiang River

J Deng, X Zhang, X Yao, J Rao, F Dai, H Wang… - Scientific Reports, 2024 - nature.com
Fish diversity, an important indicator of aquatic ecosystem health, is declining due to water
pollution, overfishing, climate change, and invasive species. Effective surveying and …

Well-intentioned initiatives hinder understanding biodiversity conservation: an essay on a recent deep-learning image classifier for Amazonian fishes

DS Campos, RF de Oliveira, L de Oliveira Vieira… - Reviews in Fish Biology …, 2024 - Springer
The identification of fish species by non-specialists remains a constant challenge for
biodiversity management. In this regard, Robillard et al. developed a machine learning …

[HTML][HTML] Application of eDNA metabarcoding in the assessment of fish biodiversity in Philippine mangroves: Challenges and opportunities

CFP Naputo, Y Isowa, ME Gerona-Daga… - Regional Studies in …, 2024 - Elsevier
Biodiversity assessments are important in designing mangrove conservation and restoration
programs. In the Philippines, conventional biodiversity assessment methods (eg, trap nets …

VertU: universal multilocus primer sets for eDNA metabarcoding of vertebrate diversity, evaluated by both artificial and natural cases

Z Wang, X Liu, D Liang, Q Wang, L Zhang… - Frontiers in Ecology …, 2023 - frontiersin.org
Environmental DNA (eDNA) metabarcoding is a powerful tool for monitoring biodiversity in
natural ecosystems. The accuracy of eDNA metabarcoding relies heavily on the PCR …

Arctic char occurrence and abundance using environmental DNA

M Seymour, A Smith - Freshwater Biology, 2023 - Wiley Online Library
Our ability to rapidly monitor species is essential for effective resource management and for
establishing conservation practices. Current monitoring practices for many fish species are …

Contrasting pollution responses of native and non-native fish communities in anthropogenically disturbed estuaries unveiled by eDNA metabarcoding

W Chen, J Wang, Y Zhao, Y He, J Chen, C Dong… - Journal of Hazardous …, 2024 - Elsevier
Understanding the influence of environmental pollutants on the assembly mechanisms of
estuarine fish communities is vital for addressing conservation challenges in these …

Environmental DNA/RNA metabarcoding for noninvasive and comprehensive monitoring and assessment of marine fishes

P Ye, J Cheng, LSH Lo, J Liu, C Li, KJY So, F Xia… - Marine Pollution …, 2025 - Elsevier
Marine fisheries resources are under increasing threat, necessitating the development of
new effective monitoring and management strategies. Environmental DNA (eDNA) and RNA …

[HTML][HTML] Environmental DNA enhances comprehension of the spatial and temporal dynamics of fish diversity in a coastal lagoon

E Banchi, N Bettoso, D Borme, S Stefanni… - Estuarine, Coastal and …, 2024 - Elsevier
Transitional environments have great ecological value and high productivity, and many
species can benefit from their sheltered conditions and food resources. In this study, we …

Environmental DNA metabarcoding of freshwater fish in Malaysian tropical rivers using short‐read nanopore sequencing as a potential biomonitoring tool

K Munian, FF Ramli, N Othman… - Molecular Ecology …, 2024 - Wiley Online Library
The approach of combining cost‐effective nanopore sequencing and emerging
environmental DNA (eDNA) metabarcoding could prove to be a promising tool for …

eDNA-based seasonal monitoring reveals fish diversity patterns in mangrove habitats of Guinea-Bissau

PJ Keleman, JD Durand, M Simier, AC Camara… - Regional Studies in …, 2025 - Elsevier
The environmental DNA (eDNA) technique characterizes spatio-temporal fish diversity
patterns along estuarine habitats, such as hard-to-reach mangroves, yet it has rarely been …