Existing and developing approaches for QSAR analysis of mixtures

EN Muratov, EV Varlamova, AG Artemenko… - Molecular …, 2012 - Wiley Online Library
This review is devoted to the critical analysis of advantages and disadvantages of existing
mixture descriptors and their usage in various QSAR/QSPR tasks. We describe good …

QSAR modeling: where have you been? Where are you going to?

A Cherkasov, EN Muratov, D Fourches… - Journal of medicinal …, 2014 - ACS Publications
Quantitative structure–activity relationship modeling is one of the major computational tools
employed in medicinal chemistry. However, throughout its entire history it has drawn both …

Simplex representation of molecular structure as universal QSAR/QSPR tool

V Kuz'min, A Artemenko, L Ognichenko, A Hromov… - Structural Chemistry, 2021 - Springer
We review the development and application of the Simplex approach for the solution of
various QSAR/QSPR problems. The general concept of the simplex method and its varieties …

Does rational selection of training and test sets improve the outcome of QSAR modeling?

TM Martin, P Harten, DM Young… - Journal of chemical …, 2012 - ACS Publications
Prior to using a quantitative structure activity relationship (QSAR) model for external
predictions, its predictive power should be established and validated. In the absence of a …

Alarms about structural alerts

VM Alves, EN Muratov, SJ Capuzzi, R Politi, Y Low… - Green …, 2016 - pubs.rsc.org
Structural alerts are widely accepted in chemical toxicology and regulatory decision support
as a simple and transparent means to flag potential chemical hazards or group compounds …

Hierarchical QSAR technology based on the Simplex representation of molecular structure

VE Kuz'min, AG Artemenko, EN Muratov - Journal of computer-aided …, 2008 - Springer
This article is about the hierarchical quantitative structure–activity relationship technology
(HiT QSAR) based on the Simplex representation of molecular structure (SiRMS) and its …

Development, validation, and application of a human reproductive toxicity prediction model based on adverse outcome pathway

H Tan, J Wu, R Zhang, C Zhang, W Li… - Environmental …, 2022 - ACS Publications
A growing number of environmental contaminants have been proved to have reproductive
toxicity to males and females. However, the unclear toxicological mechanism of reproductive …

Pred-skin: a web portal for accurate prediction of human skin sensitizers

JVB Borba, RC Braga, VM Alves… - Chemical Research …, 2020 - ACS Publications
Safety assessment is an essential component of the regulatory acceptance of industrial
chemicals. Previously, we have developed a model to predict the skin sensitization potential …

Hierarchic system of QSAR models (1D–4D) on the base of simplex representation of molecular structure

VE Kuz'min, AG Artemenko, PG Polischuk… - Journal of molecular …, 2005 - Springer
In this work, a hierarchic system of QSAR models from 1D to 4D is considered on the basis
of the simplex representation of molecular structure (SiRMS). The essence of this system is …

Pharmacokinetics Profiler (PhaKinPro): Model Development, Validation, and Implementation as a Web Tool for Triaging Compounds with Undesired …

M Rath, J Wellnitz, HJ Martin, C Melo-Filho… - Journal of Medicinal …, 2024 - ACS Publications
Computational models that predict pharmacokinetic properties are critical to deprioritize
drug candidates that emerge as hits in high-throughput screening campaigns. We collected …