What's on the other side of the gate: a structural perspective on DNA gate opening of type IA and IIA DNA topoisomerases

V Vidmar, M Vayssières, V Lamour - International Journal of Molecular …, 2023 - mdpi.com
DNA topoisomerases have an essential role in resolving topological problems that arise due
to the double-helical structure of DNA. They can recognise DNA topology and catalyse …

Inhibition of topoisomerases by metal thiosemicarbazone complexes

X Jiang, LA Fielding, H Davis, W Carroll… - International Journal of …, 2023 - mdpi.com
Topoisomerases, common targets for anti-cancer therapeutics, are crucial enzymes for DNA
replication, transcription, and many other aspects of DNA metabolism. The potential anti …

[PDF][PDF] Expanded dataset reveals the emergence and evolution of DNA gyrase in Archaea

P Villain, R Catchpole, P Forterre… - Molecular biology …, 2022 - academic.oup.com
DNA gyrase is a type II topoisomerase with the unique capacity to introduce negative
supercoiling in DNA. In bacteria, DNA gyrase has an essential role in the homeostatic …

An introduction to magnetic tweezers

D Dulin - Single Molecule Analysis: Methods and Protocols, 2023 - Springer
Magnetic tweezers are a single-molecule force and torque spectroscopy technique that
enable the mechanical interrogation in vitro of biomolecules, such as nucleic acids and …

Structural insights into the DNA topoisomerase II of the African swine fever virus

J Cong, Y Xin, H Kang, Y Yang, C Wang… - Nature …, 2024 - nature.com
Type II topoisomerases are ubiquitous enzymes that play a pivotal role in modulating the
topological configuration of double-stranded DNA. These topoisomerases are required for …

Evolution and diversity of the TopoVI and TopoVI-like subunits with extensive divergence of the TOPOVIBL subunit

J Brinkmeier, S Coelho, B de Massy… - Molecular Biology and …, 2022 - academic.oup.com
Type II DNA topoisomerases regulate topology by double-stranded DNA cleavage and
ligation. The TopoVI family of DNA topoisomerase, first identified and biochemically …

[PDF][PDF] Phylogenetic distribution of DNA topoisomerase VI and its distinction from SPO11

AMB Allen, A Maxwell - NAR Genomics and Bioinformatics, 2024 - academic.oup.com
DNA topoisomerases (topos) are major targets for antimicrobial and chemotherapeutic
drugs due to their fundamental roles in regulating DNA topology. Type II topos are essential …

Variation of Structure and Cellular Functions of Type IA Topoisomerases across the Tree of Life

K Tan, YC Tse-Dinh - Cells, 2024 - mdpi.com
Topoisomerases regulate the topological state of cellular genomes to prevent impediments
to vital cellular processes, including replication and transcription from suboptimal …

[HTML][HTML] Review and Current Perspectives on DNA Topoisomerase I and II Enzymes of Fungi as Study Models for the Development of New Antifungal Drugs

D Andrade-Pavón, O Gómez-García, L Villa-Tanaca - Journal of Fungi, 2024 - mdpi.com
Fungal infections represent a growing public health problem, mainly stemming from two
phenomena. Firstly, certain diseases (eg, AIDS and COVID-19) have emerged that weaken …

[HTML][HTML] Geometry of Braided DNA Dictates Supercoiling Partition

Y Hong, S ha Park, H Wang, MD Wang - bioRxiv, 2024 - pmc.ncbi.nlm.nih.gov
During DNA replication, the replisome must rotate relative to the DNA substrate, generating
supercoiling that must be partitioned in front of or behind the replisome. Supercoiling …