[HTML][HTML] Harmful algal blooms and their effects in coastal seas of Northern Europe

B Karlson, P Andersen, L Arneborg, A Cembella… - Harmful Algae, 2021 - Elsevier
Harmful algal blooms (HAB) are recurrent phenomena in northern Europe along the coasts
of the Baltic Sea, Kattegat-Skagerrak, eastern North Sea, Norwegian Sea and the Barents …

Phylum Gemmatimonadota and its role in the environment

I Mujakić, K Piwosz, M Koblížek - Microorganisms, 2022 - mdpi.com
Bacteria are an important part of every ecosystem that they inhabit on Earth. Environmental
microbiologists usually focus on a few dominant bacterial groups, neglecting less abundant …

Analysing microbial community composition through amplicon sequencing: from sampling to hypothesis testing

LW Hugerth, AF Andersson - Frontiers in microbiology, 2017 - frontiersin.org
Microbial ecology as a scientific field is fundamentally driven by technological advance. The
past decade's revolution in DNA sequencing cost and throughput has made it possible for …

Colonization and succession within the human gut microbiome by archaea, bacteria, and microeukaryotes during the first year of life

L Wampach, A Heintz-Buschart, A Hogan… - Frontiers in …, 2017 - frontiersin.org
Perturbations to the colonization process of the human gastrointestinal tract have been
suggested to result in adverse health effects later in life. Although much research has been …

Contrasting prevalence of selection and drift in the community structuring of bacteria and microbial eukaryotes

R Logares, SVM Tesson, B Canbäck… - Environmental …, 2018 - Wiley Online Library
Whether or not communities of microbial eukaryotes are structured in the same way as
bacteria is a general and poorly explored question in ecology. Here, we investigated this …

Phytoplankton community and HAB species in the South China Sea detected by morphological and metabarcoding approaches

Z Wang, L Liu, Y Tang, A Li, C Liu, C Xie, L Xiao, S Lu - Harmful Algae, 2022 - Elsevier
The southern Chinese coast is one of the most developed regions in China and is an area
where harmful algal blooms (HABs) have occurred frequently. In this study, differences in the …

Tracking the influence of antibiotics, antibiotic resistomes, and salinity gradient in modulating microbial community assemblage of surface water and the ecological …

OE Ohore, Y Wei, Y Wang, AS Nwankwegu, Z Wang - Chemosphere, 2022 - Elsevier
The ecological impacts of antibiotics and antibiotic resistance genes (ARGs) on water
ecology remain elusive in natural environments. We investigated the influence of antibiotics …

DNA metabarcoding highlights cyanobacteria as the main source of primary production in a pelagic food web model

A Novotny, B Serandour, S Kortsch, B Gauzens… - Science …, 2023 - science.org
Models that estimate rates of energy flow in complex food webs often fail to account for
species-specific prey selectivity of diverse consumer guilds. While DNA metabarcoding is …

Reconstructing marine plankton food web interactions using DNA metabarcoding

S Zamora‐Terol, A Novotny, M Winder - Molecular Ecology, 2020 - Wiley Online Library
Abstract Knowledge of zooplankton in situ diet is critical for accurate assessment of marine
ecosystem function and structure, but due to methodological constraints, there is still a …

Short‐and long‐read metabarcoding of the eukaryotic rRNA operon: evaluation of primers and comparison to shotgun metagenomics sequencing

MAC Latz, V Grujcic, S Brugel, J Lycken… - Molecular Ecology …, 2022 - Wiley Online Library
High‐throughput sequencing‐based analysis of microbial diversity has evolved vastly over
the last decade. Currently, the go‐to method for studying microbial eukaryotes is short‐read …