Ligand-induced proton transfer and low-barrier hydrogen bond revealed by X-ray crystallography

DA Nichols, JC Hargis, R Sanishvili… - Journal of the …, 2015 - ACS Publications
Ligand binding can change the p K a of protein residues and influence enzyme catalysis.
Herein, we report three ultrahigh resolution X-ray crystal structures of CTX-M β-lactamase …

Low-barrier hydrogen bonds in proteins

MV Hosur, R Chitra, S Hegde… - Crystallography …, 2013 - Taylor & Francis
Hydrogen bonding interactions are one of the most important chemical interactions among
materials, especially biological materials, which help confer specificity, which is crucial for …

The pathway for serial proton supply to the active site of nitrogenase: enhanced density functional modeling of the Grotthuss mechanism

I Dance - Dalton Transactions, 2015 - pubs.rsc.org
Nitrogenase contains a well defined and conserved chain of water molecules leading to the
FeMo cofactor (FeMo-co, an [Fe7MoCS9] cluster with bidentate chelation of Mo by …

Direct evidence of a low barrier hydrogen bond in the catalytic triad of a serine protease

P Agback, T Agback - Scientific Reports, 2018 - nature.com
Serine proteases are one of the largest groups of enzymes, found in both eukaryotes and
prokaryotes, and are responsible for many different functions. The detailed information about …

Are ionic liquids pairwise in gas phase? A cluster approach and in situ IR study

K Dong, L Zhao, Q Wang, Y Song… - Physical Chemistry …, 2013 - pubs.rsc.org
In this work, we discussed the vaporization and gas species of ionic liquids (ILs) by a cluster
approach of quantum statistical thermodynamics proposed by R. Luwig (Phys. Chem. Chem …

Correlation between electron localization and metal ion mutagenicity in DNA synthesis from QM/MM calculations

R Chaudret, JP Piquemal, GA Cisneros - Physical Chemistry Chemical …, 2011 - pubs.rsc.org
DNA polymerases require two divalent metal ions in the active site for catalysis. Mg2+ has
been confirmed to be the most probable cation utilized by most polymerases in vivo. Other …

Nonclassical CH− π supramolecular interactions in artemisinic acid favor a single conformation, yielding high diastereoselectivity in the reduction with diazene

B Castro, R Chaudret, G Ricci, M Kurz… - The Journal of …, 2014 - ACS Publications
The high diastereoselectivity of the hydrogenation of artemisinate by diazene to form
dihydroartemisinate (diastereoselective ratio, dr, 97: 3) necessary for efficient production of …

Stereoselectivity through a network of non-classical CH weak interactions: a prospective study of a bicyclic organocatalytic scaffold

JH Aasheim, H Fliegl, E Uggerud… - New Journal of …, 2014 - pubs.rsc.org
A prospective novel organocatalyst scaffold has been investigated by computational studies
for its potential to induce stereoselective reactions. Density functional theory calculations …

Characterizing Hydrogen-Bond Interactions in Pyrazinetetracarboxamide Complexes: Insights from Experimental and Quantum Topological Analyses

J Lohrman, EA Vázquez-Montelongo… - Inorganic …, 2018 - ACS Publications
Experimental and topological analyses of dipalladium (II) complexes with
pyrazinetetracarboxamide ligands containing tetraethyl (1), tetrahexyl (2), and tetrakis (2 …

Toward a ligand specific of Pb2+ with respect to the Zn2+ and Ca2+ cations: A track from quantum chemistry

MC van Severen, R Chaudret, O Parisel… - Chemical Physics …, 2012 - Elsevier
From computational chemistry simulations, a ligand has emerged that could be selective of
Pb2+ toward Zn2+ and Ca2+, an important point when designing new chelators usable in …