Current two‐dimensional electrophoresis technology for proteomics

A Görg, W Weiss, MJ Dunn - Proteomics, 2004 - Wiley Online Library
Abstract Two‐dimensional gel electrophoresis (2‐DE) with immobilized pH gradients (IPGs)
combined with protein identification by mass spectrometry (MS) is currently the workhorse …

State‐of‐the‐art in phosphoproteomics

J Reinders, A Sickmann - Proteomics, 2005 - Wiley Online Library
Presently, phosphorylation of proteins is the most studied and best understood PTM.
However, the analysis of phosphoproteins and phosphopeptides is still one of the most …

Highly selective enrichment of phosphorylated peptides using titanium dioxide

TE Thingholm, TJD Jørgensen, ON Jensen… - Nature protocols, 2006 - nature.com
The characterization of phosphorylated proteins is a challenging analytical task since many
of the proteins targeted for phosphorylation are low in abundance and phosphorylation is …

A neutral loss activation method for improved phosphopeptide sequence analysis by quadrupole ion trap mass spectrometry

MJ Schroeder, J Shabanowitz, JC Schwartz… - Analytical …, 2004 - ACS Publications
Recent advances in phosphopeptide enrichment prior to mass spectrometric analysis show
genuine promise for characterization of phosphoproteomes. Tandem mass spectrometry of …

Analysis of phosphorylated proteins and peptides by mass spectrometry

DT McLachlin, BT Chait - Current opinion in chemical biology, 2001 - Elsevier
Phosphorylation on serine, threonine and tyrosine residues is an extremely important
modulator of protein function. Therefore, there is a great need for methods capable of …

Characterization of phosphoproteins from electrophoretic gels by nanoscale Fe (III) affinity chromatography with off‐line mass spectrometry analysis

A Stensballe, S Andersen… - PROTEOMICS …, 2001 - Wiley Online Library
Detailed characterization of phosphoproteins as well as other post‐translationally modified
proteins is required to fully understand protein function and regulatory events in cells and …

Technologies and challenges in large‐scale phosphoproteomics

K Engholm‐Keller, MR Larsen - Proteomics, 2013 - Wiley Online Library
Phosphorylation, the reversible addition of a phosphate group to amino acid side chains of
proteins, is a fundamental regulator of protein activity, stability, and molecular interactions …

2D or not 2D

SJ Fey, PM Larsen - Current Opinion in Chemical Biology, 2001 - Elsevier
2D gel electrophoresis is the technology that everyone loves to hate—it requires manual
dexterity and precision to reproduce precisely and is thus not well-suited as a high …

Phosphoric acid as a matrix additive for MALDI MS analysis of phosphopeptides and phosphoproteins

S Kjellström, ON Jensen - Analytical chemistry, 2004 - ACS Publications
Phosphopeptides are often detected with low efficiency by MALDI MS analysis of peptide
mixtures. In an effort to improve the phosphopeptide ion response in MALDI MS, we …

Application of microfluidic devices to proteomics research: identification of trace-level protein digests and affinity capture of target peptides

J Li, T LeRiche, TL Tremblay, C Wang, E Bonneil… - Molecular & Cellular …, 2002 - ASBMB
This report describes an integrated and modular microsystem providing rapid analyses of
trace-level tryptic digests for proteomics applications. This microsystem includes an …