Multi-class and multi-scale models of complex biological phenomena

SY Jessica, N Bagheri - Current opinion in biotechnology, 2016 - Elsevier
Highlights•Choice of modeling framework should account for experimental context and
data.•Accurate models offer biological insight and explain non-intuitive observations.•Multi …

Multidisciplinary approaches to understanding collective cell migration in developmental biology

LJ Schumacher, PM Kulesa, R McLennan… - Open …, 2016 - royalsocietypublishing.org
Mathematical models are becoming increasingly integrated with experimental efforts in the
study of biological systems. Collective cell migration in developmental biology is a …

Estimation algorithm for a hybrid pde–ode model inspired by immunocompetent cancer-on-chip experiment

G Bretti, A De Ninno, R Natalini, D Peri, N Roselli - Axioms, 2021 - mdpi.com
The present work is motivated by the development of a mathematical model mimicking the
mechanisms observed in lab-on-chip experiments, made to reproduce on microfluidic chips …

An in silico Model of T Cell Infiltration Dynamics Based on an Advanced in vitro System to Enhance Preclinical Decision Making in Cancer Immunotherapy

TD Lewin, B Avignon, A Tovaglieri, L Cabon… - Frontiers in …, 2022 - frontiersin.org
Cancer immunotherapy often involves the use of engineered molecules to selectively bind
and activate T cells located within tumour tissue. Fundamental to the success of such …

[HTML][HTML] Adhesion and volume constraints via nonlocal interactions determine cell organisation and migration profiles

JA Carrillo, A Colombi, M Scianna - Journal of theoretical biology, 2018 - Elsevier
The description of the cell spatial pattern and characteristic distances is fundamental in a
wide range of physio-pathological biological phenomena, from morphogenesis to cancer …

The Mean-Field limit for hybrid models of collective motions with chemotaxis

R Natalini, T Paul - SIAM Journal on Mathematical Analysis, 2023 - SIAM
In this paper we study a general class of hybrid mathematical models of collective motions of
cells under the influence of chemical stimuli. The models are hybrid in the sense that cells …

Mean-field sparse Jurdjevic–Quinn control

M Caponigro, B Piccoli, F Rossi… - Mathematical Models and …, 2017 - World Scientific
We consider nonlinear transport equations with non-local velocity describing the time-
evolution of a measure. Such equations often appear when considering the mean-field limit …

NetLogo agent-based models as tools for understanding the self-organization of cell fate, morphogenesis and collective migration of the zebrafish posterior Lateral …

D Dalle Nogare, AB Chitnis - Seminars in cell & developmental biology, 2020 - Elsevier
Interactions between primordium cells and their environment determines the self-
organization of the zebrafish posterior Lateral Line primordium as it migrates under the skin …

A hybrid model of collective motion of discrete particles under alignment and continuum chemotaxis.

ED Costanzo, M Menci, E Messina… - … Systems-Series B, 2020 - search.ebscohost.com
In this paper we propose and study a hybrid discrete–continuous mathematical model of
collective motion under alignment and chemotaxis effect. Starting from paper [23], in which …

Microscopic, kinetic and hydrodynamic hybrid models of collective motions with chemotaxis: a numerical study

M Menci, R Natalini, T Paul - Mathematics and Mechanics of Complex …, 2023 - msp.org
A general class of hybrid models has been introduced recently, gathering the advantages of
multiscale descriptions. Concerning biological applications, the particular coupled structure …