Multifaceted computational modeling in glycoscience

S Perez, O Makshakova - Chemical Reviews, 2022 - ACS Publications
Glycoscience assembles all the scientific disciplines involved in studying various molecules
and macromolecules containing carbohydrates and complex glycans. Such an ensemble …

Functional water networks in fully hydrated photosystem II

A Sirohiwal, DA Pantazis - Journal of the American Chemical …, 2022 - ACS Publications
Water channels and networks within photosystem II (PSII) of oxygenic photosynthesis are
critical for enzyme structure and function. They control substrate delivery to the oxygen …

Mechanism of proton release during water oxidation in Photosystem II

F Allgöwer, MC Pöverlein, AW Rutherford… - Proceedings of the …, 2024 - pnas.org
Photosystem II (PSII) catalyzes light-driven water oxidation that releases dioxygen into our
atmosphere and provides the electrons needed for the synthesis of biomass. The catalysis …

Multifaceted aspects of charge transfer

JB Derr, J Tamayo, JA Clark, M Morales… - Physical Chemistry …, 2020 - pubs.rsc.org
Charge transfer and charge transport are by far among the most important processes for
sustaining life on Earth and for making our modern ways of living possible. Involving multiple …

Evolution in the Design of Water Oxidation Catalysts with Transition-Metals: A Perspective on Biological, Molecular, Supramolecular, and Hybrid Approaches

AK Singh, L Roy - ACS omega, 2024 - ACS Publications
Increased demand for a carbon-neutral sustainable energy scheme augmented by climatic
threats motivates the design and exploration of novel approaches that reserve intermittent …

The exchange of the fast substrate water in the S 2 state of photosystem II is limited by diffusion of bulk water through channels–implications for the water oxidation …

C de Lichtenberg, CJ Kim, P Chernev, RJ Debus… - Chemical …, 2021 - pubs.rsc.org
The molecular oxygen we breathe is produced from water-derived oxygen species bound to
the Mn4CaO5 cluster in photosystem II (PSII). Present research points to the central oxo …

Independent Mutation of Two Bridging Carboxylate Ligands Stabilizes Alternate Conformers of the Photosynthetic O2-Evolving Mn4CaO5 Cluster in Photosystem II

RJ Debus, PH Oyala - The Journal of Physical Chemistry B, 2024 - ACS Publications
The O2-evolving Mn4CaO5 cluster in photosystem II is ligated by six carboxylate residues.
One of these is D170 of the D1 subunit. This carboxylate bridges between one Mn ion (Mn4) …

Alteration of the O2-Producing Mn4Ca Cluster in Photosystem II by the Mutation of a Metal Ligand

RJ Debus - Biochemistry, 2021 - ACS Publications
The O2-evolving Mn4Ca cluster in photosystem II (PSII) is arranged as a distorted Mn3Ca
cube that is linked to a fourth Mn ion (denoted as Mn4) by two oxo bridges. The Mn4 and Ca …

Role of the O4 channel in photosynthetic water oxidation as revealed by Fourier transform infrared difference and time-resolved infrared analysis of the D1-S169A …

Y Shimada, T Kitajima-Ihara, R Nagao… - The journal of physical …, 2020 - ACS Publications
Photosynthetic water oxidation takes place at the Mn4CaO5 cluster in photosystem II.
Although the atomic structures of its intermediates called S states have recently been …

Mechanism of Proton Transfer through the D1-E65/D2-E312 Gate during Photosynthetic Water Oxidation

T Noguchi - The Journal of Physical Chemistry B, 2024 - ACS Publications
In photosystem II, the D1-E65/D2-E312 dyad in the Cl-1 channel has been proposed to play
a pivotal role in proton transfer during water oxidation. However, the precise mechanism …