The prediction of protein structures from sequences is an important task for function
prediction, drug design, and related biological processes understanding. Recent advances …

Protein representation learning plays a crucial role in understanding the structure and
function of proteins, which are essential biomolecules involved in various biological …

Advances in deep learning models have revolutionized the study of biomolecule systems
and their mechanisms. Graph representation learning, in particular, is important for …

Protein structure prediction is important in several applications such as structural
bioinformatics. In this scope, the critical assessment of the protein structure prediction …

Proteins are the main building blocks for any form of life known to us as of now, and it is the
actuators of biophysical and chemical events occurring in living organisms. Biological …

Hydrogen bonds play a vital role in protein-DNA interactions. In particular, side chain-base
hydrogen bonds are crucial to the binding specificity between protein and DNA. Mutations …