Mitochondrial protein transport: Versatility of translocases and mechanisms

JD Busch, LF Fielden, N Pfanner, N Wiedemann - Molecular Cell, 2023 - cell.com
Biogenesis of mitochondria requires the import of approximately 1,000 different precursor
proteins into and across the mitochondrial membranes. Mitochondria exhibit a wide variety …

[HTML][HTML] Bacterial outer membrane proteins assemble via asymmetric interactions with the BamA β-barrel

MT Doyle, HD Bernstein - Nature communications, 2019 - nature.com
The integration of β-barrel proteins into the bacterial outer membrane (OM) is catalysed by
the β-barrel assembly machinery (BAM). The central BAM subunit (BamA) itself contains a β …

[HTML][HTML] Cryo-EM structures reveal multiple stages of bacterial outer membrane protein folding

MT Doyle, JR Jimah, T Dowdy, SI Ohlemacher… - Cell, 2022 - cell.com
Transmembrane β barrel proteins are folded into the outer membrane (OM) of Gram-
negative bacteria by the β barrel assembly machinery (BAM) via a poorly understood …

Biogenesis of mitochondrial β‐barrel membrane proteins

I Ganesan, JV Busto, N Pfanner… - FEBS Open bio, 2024 - Wiley Online Library
β‐barrel membrane proteins in the mitochondrial outer membrane are crucial for mediating
the metabolite exchange between the cytosol and the mitochondrial intermembrane space …

Bridging themes: short protein segments found in different architectures

R Kolodny, S Nepomnyachiy, DS Tawfik… - … biology and evolution, 2021 - academic.oup.com
The vast majority of theoretically possible polypeptide chains do not fold, let alone confer
function. Hence, protein evolution from preexisting building blocks has clear potential …

[HTML][HTML] Identification and analysis of natural building blocks for evolution-guided fragment-based protein design

N Ferruz, F Lobos, D Lemm, S Toledo-Patino… - Journal of molecular …, 2020 - Elsevier
Natural evolution has generated an impressively diverse protein universe via duplication
and recombination from a set of protein fragments that served as building blocks. The …

Small protein folds at the root of an ancient metabolic network

H Raanan, S Poudel, DH Pike… - Proceedings of the …, 2020 - National Acad Sciences
Life on Earth is driven by electron transfer reactions catalyzed by a suite of enzymes that
comprise the superfamily of oxidoreductases (Enzyme Classification EC1). Most modern …

Chaperones Skp and SurA dynamically expand unfolded OmpX and synergistically disassemble oligomeric aggregates

N Chamachi, A Hartmann, MQ Ma… - Proceedings of the …, 2022 - National Acad Sciences
Periplasmic chaperones 17-kilodalton protein (Skp) and survival factor A (SurA) are
essential players in outer membrane protein (OMP) biogenesis. They prevent unfolded …

[HTML][HTML] Effects of Cinnamon Essential Oil on Oxidative Damage and Outer Membrane Protein Genes of Salmonella enteritidis Cells

Z Zhang, Y Zhao, X Chen, W Li, W Li, J Du, L Wang - Foods, 2022 - mdpi.com
Salmonella is an important pathogen causing food poisoning. Food safety and health are
the themes of today′ s society. As a class of food-borne pathogens, Salmonella enteritidis …

[HTML][HTML] Searching protein space for ancient sub-domain segments

R Kolodny - Current Opinion in Structural Biology, 2021 - Elsevier
Highlights•Sub-domain segments may carry hints to the evolution of protein
domains.•Similar sub-domain segments shared among globally dissimilar domains are …