[HTML][HTML] Single-cell RNA sequencing of developing maize ears facilitates functional analysis and trait candidate gene discovery

X Xu, M Crow, BR Rice, F Li, B Harris, L Liu… - Developmental Cell, 2021 - cell.com
Crop productivity depends on activity of meristems that produce optimized plant
architectures, including that of the maize ear. A comprehensive understanding of …

BSAseq: an interactive and integrated web-based workflow for identification of causal mutations in bulked F2 populations

L Wang, Z Lu, M Regulski, Y Jiao, J Chen… - …, 2021 - academic.oup.com
With the advance of next-generation sequencing technologies and reductions in the costs of
these techniques, bulked segregant analysis (BSA) has become not only a powerful tool for …

SciApps: An Automated Platform for Processing and Distribution of Plant Genomics Data

L Wang, Z Lu, P Van Buren, D Ware - Plant Bioinformatics: Methods and …, 2022 - Springer
SciApps is an open-source, web-based platform for processing, storing, visualizing, and
distributing genomic data and analysis results. Built upon the Tapis (formerly Agave) …

Comparative Analysis of Sorghum EMS Mutants and Natural Populations

L Wang, A Lipzen, Z Lu, J Chen, X Wang… - bioRxiv, 2021 - biorxiv.org
To build a large-scale genomic resource for functional validation of sorghum genes through
EMS-mutagenized BTx623 seeds, we deep sequenced (30-60X) an additional 445 …