[HTML][HTML] PyMC: a modern, and comprehensive probabilistic programming framework in Python

O Abril-Pla, V Andreani, C Carroll, L Dong… - PeerJ Computer …, 2023 - peerj.com
PyMC is a probabilistic programming library for Python that provides tools for constructing
and fitting Bayesian models. It offers an intuitive, readable syntax that is close to the natural …

Diffusion probabilistic modeling of protein backbones in 3d for the motif-scaffolding problem

BL Trippe, J Yim, D Tischer, D Baker… - arXiv preprint arXiv …, 2022 - arxiv.org
Construction of a scaffold structure that supports a desired motif, conferring protein function,
shows promise for the design of vaccines and enzymes. But a general solution to this motif …

Sequential monte carlo: A unified review

AG Wills, TB Schön - Annual Review of Control, Robotics, and …, 2023 - annualreviews.org
Sequential Monte Carlo methods—also known as particle filters—offer approximate
solutions to filtering problems for nonlinear state-space systems. These filtering problems …

An invitation to sequential Monte Carlo samplers

C Dai, J Heng, PE Jacob, N Whiteley - Journal of the American …, 2022 - Taylor & Francis
ABSTRACT Statisticians often use Monte Carlo methods to approximate probability
distributions, primarily with Markov chain Monte Carlo and importance sampling. Sequential …

Practical and asymptotically exact conditional sampling in diffusion models

L Wu, B Trippe, C Naesseth, D Blei… - Advances in Neural …, 2024 - proceedings.neurips.cc
Diffusion models have been successful on a range of conditional generation tasks including
molecular design and text-to-image generation. However, these achievements have …

Automatic differentiation of programs with discrete randomness

G Arya, M Schauer, F Schäfer… - Advances in Neural …, 2022 - proceedings.neurips.cc
Automatic differentiation (AD), a technique for constructing new programs which compute
the derivative of an original program, has become ubiquitous throughout scientific …

Differentiable particle filtering via entropy-regularized optimal transport

A Corenflos, J Thornton… - International …, 2021 - proceedings.mlr.press
Particle Filtering (PF) methods are an established class of procedures for performing
inference in non-linear state-space models. Resampling is a key ingredient of PF necessary …

[图书][B] Distributional reinforcement learning

MG Bellemare, W Dabney, M Rowland - 2023 - books.google.com
The first comprehensive guide to distributional reinforcement learning, providing a new
mathematical formalism for thinking about decisions from a probabilistic perspective …

Path integral sampler: a stochastic control approach for sampling

Q Zhang, Y Chen - arXiv preprint arXiv:2111.15141, 2021 - arxiv.org
We present Path Integral Sampler~(PIS), a novel algorithm to draw samples from
unnormalized probability density functions. The PIS is built on the Schr\" odinger bridge …

[图书][B] Bayesian modeling and computation in Python

OA Martin, R Kumar, J Lao - 2021 - taylorfrancis.com
Bayesian Modeling and Computation in Python aims to help beginner Bayesian
practitioners to become intermediate modelers. It uses a hands on approach with PyMC3 …