Structure and function of noncanonical nucleobases

T Carell, C Brandmayr, A Hienzsch… - Angewandte Chemie …, 2012 - Wiley Online Library
DNA and RNA contain, next to the four canonical nucleobases, a number of modified
nucleosides that extend their chemical information content. RNA is particularly rich in …

The queuine micronutrient: charting a course from microbe to man

C Fergus, D Barnes, MA Alqasem, VP Kelly - Nutrients, 2015 - mdpi.com
Micronutrients from the diet and gut microbiota are essential to human health and wellbeing.
Arguably, among the most intriguing and enigmatic of these micronutrients is queuine, an …

[图书][B] DNA and RNA modification enzymes: structure, mechanism, function and evolution

H Grosjean - 2009 - taylorfrancis.com
This volume is a timely and comprehensive description of the many facets of DNA and RNA
modification-editing processes and to some extent repair mechanisms. Each chapter offers …

Comparison of a preQ1 riboswitch aptamer in metabolite-bound and free states with implications for gene regulation

JL Jenkins, J Krucinska, RM McCarty… - Journal of Biological …, 2011 - ASBMB
Riboswitches are RNA regulatory elements that govern gene expression by recognition of
small molecule ligands via a high affinity aptamer domain. Molecular recognition can lead to …

A small RNA that cooperatively senses two stacked metabolites in one pocket for gene control

GM Schroeder, CE Cavender, ME Blau… - Nature …, 2022 - nature.com
Riboswitches are structured non-coding RNAs often located upstream of essential genes in
bacterial messenger RNAs. Such RNAs regulate expression of downstream genes by …

Nonessential tRNA and rRNA modifications impact the bacterial response to sub-MIC antibiotic stress

A Babosan, L Fruchard, E Krin, A Carvalho, D Mazel… - …, 2022 - academic.oup.com
Antimicrobial resistance develops as a major problem in infectious diseases treatment.
While antibiotic resistance mechanisms are usually studied using lethal antibiotic doses …

A riboswitch separated from its ribosome-binding site still regulates translation

GM Schroeder, O Akinyemi, J Malik… - Nucleic Acids …, 2023 - academic.oup.com
Riboswitches regulate downstream gene expression by binding cellular metabolites.
Regulation of translation initiation by riboswitches is posited to occur by metabolite …

Transfer RNA modification: presence, synthesis, and function

GR Björk, TG Hagervall - EcoSal Plus, 2014 - Am Soc Microbiol
Transfer RNA (tRNA) from all organisms on this planet contains modified nucleosides, which
are derivatives of the four major nucleosides. tRNA from Escherichia coli/Salmonella …

Roles of two-component signal transduction systems in Shigella virulence

M Pasqua, M Coluccia, Y Eguchi, T Okajima, M Grossi… - Biomolecules, 2022 - mdpi.com
Two-component signal transduction systems (TCSs) are widespread types of protein
machinery, typically consisting of a histidine kinase membrane sensor and a cytoplasmic …

Structural Insights into riboswitch control of the biosynthesis of queuosine, a modified nucleotide found in the anticodon of tRNA

M Kang, R Peterson, J Feigon - Molecular cell, 2009 - cell.com
The modified nucleotide queuosine (Q) is almost universally found in the anticodon wobble
position of specific tRNAs. In many bacteria, biosynthesis of Q is modulated by a class of …