Phylogenomic approaches untangle early divergences and complex diversifications of the olive plant family

W Dong, E Li, Y Liu, C Xu, Y Wang, K Liu, X Cui, J Sun… - BMC biology, 2022 - Springer
Background Deep-branching phylogenetic relationships are often difficult to resolve
because phylogenetic signals are obscured by the long history and complexity of …

Dead-end hybridization in walnut trees revealed by large-scale genomic sequence data

WP Zhang, L Cao, XR Lin, YM Ding… - Molecular Biology …, 2022 - academic.oup.com
Although hybridization plays a large role in speciation, some unknown fraction of hybrid
individuals never reproduces, instead remaining as genetic dead-ends. We investigated a …

Synthesis of nuclear and chloroplast data combined with network analyses supports the polyploid origin of the apple tribe and the hybrid origin of the Maleae …

RGJ Hodel, EA Zimmer, BB Liu, J Wen - Frontiers in Plant Science, 2022 - frontiersin.org
Plant biologists have debated the evolutionary origin of the apple tribe (Maleae; Rosaceae)
for over a century. The “wide-hybridization hypothesis” posits that the pome-bearing …

Genomic insights into biased allele loss and increased gene numbers after genome duplication in autotetraploid Cyclocarya paliurus

RM Yu, N Zhang, BW Zhang, Y Liang, XX Pang, L Cao… - BMC biology, 2023 - Springer
Background Autopolyploidy is a valuable model for studying whole-genome duplication
(WGD) without hybridization, yet little is known about the genomic structural and functional …

Maternal Donor and Genetic Variation of Lagerstroemia indica Cultivars

C Guo, K Liu, E Li, Y Chen, J He, W Li, W Dong… - International Journal of …, 2023 - mdpi.com
Lagerstroemia indica L. is a well-known ornamental plant with large pyramidal racemes,
long flower duration, and diverse colors and cultivars. It has been cultivated for nearly 1600 …

Genomic Analysis of Plastid–Nuclear Interactions and Differential Evolution Rates in Coevolved Genes across Juglandaceae Species

Y Yang, ES Forsythe, YM Ding… - Genome Biology and …, 2023 - academic.oup.com
The interaction between the nuclear and chloroplast genomes in plants is crucial for
preserving essential cellular functions in the face of varying rates of mutation, levels of …

Potential contribution of floral thermogenesis to cold adaptation, distribution pattern, and population structure of thermogenic and non/slightly thermogenic …

MP Sato, A Matsuo, K Otsuka, KT Takano… - Ecology and …, 2023 - Wiley Online Library
The genus Symplocarpus in basal Araceae includes both thermogenic and non/slightly
thermogenic species that prefer cold environments. If floral thermogenesis of Symplocarpus …

Genomic data provide a robust phylogeny backbone for Rhodiola L.(Crassulaceae) and reveal extensive reticulate evolution during its rapid radiation

CQ Ren, DQ Zhang, XY Liu, JQ Zhang - Molecular Phylogenetics and …, 2023 - Elsevier
Abstract The Tibetan Plateau and adjacent mountain regions (TP; including the Tibetan
Plateau, Himalaya, Hengduan Mountains and Mountains of Central Asia) harbor great …

Historical climate change and vicariance events contributed to the intercontinental disjunct distribution pattern of ash species (Fraxinus, Oleaceae)

E Li, Y Wang, K Liu, Y Liu, C Xu, W Dong… - Communications …, 2024 - nature.com
Abstract The Northern Hemisphere temperate forests exhibit a disjunct distributional pattern
in Europe, North America, and East Asia. Here, to reveal the promoter of intercontinental …

Ancient structural variants control sex-specific flowering time morphs in walnuts and hickories

JS Groh, DC Vik, M Davis, JG Monroe, KA Stevens… - Science, 2025 - science.org
Balanced mating type polymorphisms offer a distinct window into the forces shaping sexual
reproduction strategies. Multiple hermaphroditic genera in Juglandaceae, including walnuts …