Why don't we share data and code? Perceived barriers and benefits to public archiving practices
The biological sciences community is increasingly recognizing the value of open,
reproducible and transparent research practices for science and society at large. Despite …
reproducible and transparent research practices for science and society at large. Despite …
How open science helps researchers succeed
Open access, open data, open source and other open scholarship practices are growing in
popularity and necessity. However, widespread adoption of these practices has not yet been …
popularity and necessity. However, widespread adoption of these practices has not yet been …
Snakes on a spaceship—An overview of Python in heliophysics
Computational analysis has become ubiquitous within the heliophysics community.
However, community standards for peer review of codes and analysis have lagged behind …
However, community standards for peer review of codes and analysis have lagged behind …
Ten simple rules for the care and feeding of scientific data
In the early 1600s, Galileo Galilei turned a telescope toward Jupiter. In his log book each
night, he drew to-scale schematic diagrams of Jupiter and some oddly moving points of light …
night, he drew to-scale schematic diagrams of Jupiter and some oddly moving points of light …
Characterising reproducibility debt in scientific software: A systematic literature review
Context: In scientific software, the inability to reproduce results is often due to technical
issues and challenges in recreating the full computational workflow from the original …
issues and challenges in recreating the full computational workflow from the original …
JANPA: An open source cross-platform implementation of the Natural Population Analysis on the Java platform
TY Nikolaienko, LA Bulavin, DM Hovorun - Computational and Theoretical …, 2014 - Elsevier
The algorithms for constructing Natural Atomic Orbitals (NAOs) from a reduced one-particle
density matrix as well as for Natural Population Analysis (NPA) are reviewed and their novel …
density matrix as well as for Natural Population Analysis (NPA) are reviewed and their novel …
A framework for creating knowledge graphs of scientific software metadata
A Kelley, D Garijo - Quantitative Science Studies, 2021 - direct.mit.edu
An increasing number of researchers rely on computational methods to generate or
manipulate the results described in their scientific publications. Software created to this end …
manipulate the results described in their scientific publications. Software created to this end …
Artificial intelligence for modeling complex systems: taming the complexity of expert models to improve decision making
Major societal and environmental challenges involve complex systems that have diverse
multi-scale interacting processes. Consider, for example, how droughts and water reserves …
multi-scale interacting processes. Consider, for example, how droughts and water reserves …
Reproducibility in NLP: What Have We Learned from the Checklist?
Scientific progress in NLP rests on the reproducibility of researchers' claims. The* CL
conferences created the NLP Reproducibility Checklist in 2020 to be completed by authors …
conferences created the NLP Reproducibility Checklist in 2020 to be completed by authors …
AtChem (version 1), an open-source box model for the Master Chemical Mechanism
R Sommariva, S Cox, C Martin… - Geoscientific Model …, 2020 - gmd.copernicus.org
AtChem is an open-source zero-dimensional box model for atmospheric chemistry. Any
general set of chemical reactions can be used with AtChem, but the model was designed …
general set of chemical reactions can be used with AtChem, but the model was designed …