Applications of machine learning in human microbiome studies: a review on feature selection, biomarker identification, disease prediction and treatment

LJ Marcos-Zambrano… - Frontiers in …, 2021 - frontiersin.org
The number of microbiome-related studies has notably increased the availability of data on
human microbiome composition and function. These studies provide the essential material …

The coral microbiome: towards an understanding of the molecular mechanisms of coral–microbiota interactions

AR Mohamed, MA Ochsenkühn… - FEMS Microbiology …, 2023 - academic.oup.com
Corals live in a complex, multipartite symbiosis with diverse microbes across kingdoms,
some of which are implicated in vital functions, such as those related to resilience against …

Identification of shared and disease-specific host gene–microbiome associations across human diseases using multi-omic integration

S Priya, MB Burns, T Ward, RAT Mars… - Nature …, 2022 - nature.com
While gut microbiome and host gene regulation independently contribute to gastrointestinal
disorders, it is unclear how the two may interact to influence host pathophysiology. Here we …

The relationship between the gut microbiome and host gene expression: a review

RG Nichols, ER Davenport - Human genetics, 2021 - Springer
Despite the growing knowledge surrounding host–microbiome interactions, we are just
beginning to understand how the gut microbiome influences—and is influenced by—host …

Dietary implications of the bidirectional relationship between the gut microflora and inflammatory diseases with special emphasis on irritable bowel disease: current …

T Aziz, AA Khan, A Tzora, C Voidarou, I Skoufos - Nutrients, 2023 - mdpi.com
The immune system is vital for safeguarding the human body against infections and
inflammatory diseases. The role of diet and meal patterns in modulating immune function is …

A framework for understanding gene expression plasticity and its influence on stress tolerance

HE Rivera, HE Aichelman, JE Fifer… - Molecular …, 2021 - Wiley Online Library
Phenotypic plasticity can serve as a stepping stone towards adaptation. Recently, studies
have shown that gene expression contributes to emergent stress responses such as thermal …

[HTML][HTML] Probiotics as a biological detoxification tool of food chemical contamination: A review

P Średnicka, E Juszczuk-Kubiak, M Wójcicki… - Food and Chemical …, 2021 - Elsevier
Nowadays, people are exposed to diverse environmental and chemical pollutants produced
by industry and agriculture. Food contaminations such as persistent organic pollutants …

[HTML][HTML] Metagenomics and artificial intelligence in the context of human health

AK Wani, P Roy, V Kumar - Infection, Genetics and Evolution, 2022 - Elsevier
Human microbiome is ubiquitous, dynamic, and site-specific consortia of microbial
communities. The pathogenic nature of microorganisms within human tissues has led to an …

Gut microbiota and microbial metabolism in early risk of cardiometabolic disease

CL Gabriel, JF Ferguson - Circulation Research, 2023 - Am Heart Assoc
Cardiometabolic disease comprises cardiovascular and metabolic dysfunction and
underlies the leading causes of morbidity and mortality, both within the United States and …

Administration of exogenous melatonin improves the diurnal rhythms of the gut microbiota in mice fed a high-fat diet

J Yin, Y Li, H Han, J Ma, G Liu, X Wu, X Huang… - Msystems, 2020 - Am Soc Microbiol
Melatonin, a circadian hormone, has been reported to improve host lipid metabolism by
reprogramming the gut microbiota, which also exhibits rhythmicity in a light/dark cycle …