[HTML][HTML] Agent-based approaches for biological modeling in oncology: A literature review

S Stephan, S Galland, OL Narsis, K Shoji… - Artificial Intelligence in …, 2024 - Elsevier
Context: Computational modeling involves the use of computer simulations and models to
study and understand real-world phenomena. Its application is particularly relevant in the …

DLL3 regulates Notch signaling in small cell lung cancer

JW Kim, JH Ko, J Sage - IScience, 2022 - cell.com
Tumor heterogeneity plays a critical role in tumor development and response to treatment. In
small-cell lung cancer (SCLC), intratumoral heterogeneity is driven in part by the Notch …

Nrf2 modulates the hybrid epithelial/mesenchymal phenotype and Notch signaling during collective cancer migration

SA Vilchez Mercedes, F Bocci, M Ahmed… - Frontiers in Molecular …, 2022 - frontiersin.org
Hybrid epithelial/mesenchymal cells (E/M) are key players in aggressive cancer metastasis.
It remains a challenge to understand how these cell states, which are mostly non-existent in …

Relatively rare populations of invasive cells drive progression of heterogeneous tumors

SE Leggett, MC Brennan, S Martinez, J Tien… - Cellular and Molecular …, 2024 - Springer
Introduction Breast tumors often display an astonishing degree of spatial and temporal
heterogeneity, which are associated with cancer progression, drug resistance, and relapse …

Three-dimensional computer vision for exploring heterogeneity in collective Cancer Invasion

Y Li, N Zhu, M Ahmed, J Urbina, TY Huang… - Scientific reports, 2024 - nature.com
Collective cancer invasion exhibits a hierarchical structure characterized by leader-follower
organization. Dynamic gene expression analysis of invading cells using nanobiosensors …

Optimizing locked nucleic acid modification in double-stranded biosensors for live single cell analysis

SAV Mercedes, I Eder, M Ahmed, N Zhu, PK Wong - Analyst, 2022 - pubs.rsc.org
Double-stranded (ds) biosensors are homogeneous oligonucleotide probes for detection of
nucleic acid sequences in biochemical assays and live cell imaging. Locked nucleic acid …

The alternate ligand Jagged enhances the robustness of Notch signaling patterns

M Mukherjee, H Levine - Soft Matter, 2023 - pubs.rsc.org
The Notch pathway, an example of juxtacrine signaling, is an evolutionary conserved cell–
cell communication mechanism. It governs emergent spatiotemporal patterning in tissues …

Lung cancer and miRNAs: a possible remedy for anti-metastatic, therapeutic and diagnostic applications

C Dai, H Chen, F Wang, Z Hua, L Xia, L Yuan, L Qin - 2023 - researchsquare.com
Background Lung cancer is often diagnosed as stage IV metastatic disease and is the
leading cause of cancer-related death worldwide. Expression of micro-ribonucleic acids …

[PDF][PDF] Functional characterization of transient receptor potential mucolipin-1 channels–potential target for cancer therapy

WX Siow - 2022 - edoc.ub.uni-muenchen.de
Hepatocellular carcinoma (HCC) is the most common form of liver cancer and remains the
fourth most lethal cancer worldwide. A novel druggable target is urgently needed to …

Single-Cell Analysis 2.0

TS Santra, FG Tseng - Cells, 2022 - mdpi.com
In 1665, Robert Hooke published his revolutionary book Micrographia [1], where he wrote
about his observation of box-shaped structures under a microscope. It was for the first time …