Phosphoryl transfer plays key roles in signaling, energy transduction, protein synthesis, and maintaining the integrity of the genetic material. On the surface, it would appear to be a …
For the investigation of chemical reaction networks, the identification of all relevant intermediates and elementary reactions is mandatory. Many algorithmic approaches exist …
GN Simm, M Reiher - Journal of chemical theory and computation, 2017 - ACS Publications
The construction of a reaction network containing all relevant intermediates and elementary reactions is necessary for the accurate description of chemical processes. In the case of a …
C Castro, ED Smidansky, JJ Arnold… - Nature structural & …, 2009 - nature.com
Nucleic acid polymerases catalyze the formation of DNA or RNA from nucleoside- triphosphate precursors. Amino acid residues in the active site of polymerases are thought to …
L Gorb, Y Podolyan, P Dziekonski… - Journal of the …, 2004 - ACS Publications
The results of a comprehensive study on the double-proton transfer in Adenine− Thymine (AT) and Guanine− Cytosine (GC) base pairs at room temperature in gas phase and with the …
L Yang, K Arora, WA Beard, SH Wilson… - Journal of the american …, 2004 - ACS Publications
To dissect the effects of the nucleotide-binding and catalytic metal ions on DNA polymerase mechanisms for DNA repair and synthesis, aside from the chemical reaction, we investigate …
T Ogino, TJ Green - Frontiers in microbiology, 2019 - frontiersin.org
Non-segmented negative strand (NNS) RNA viruses belonging to the order Mononegavirales are highly diversified eukaryotic viruses including significant human …
C Castro, E Smidansky… - Proceedings of the …, 2007 - National Acad Sciences
The rate-limiting step for nucleotide incorporation in the pre-steady state for most nucleic acid polymerases is thought to be a conformational change. As a result, very little …
A Shurki, A Warshel - Advances in protein chemistry, 2003 - Elsevier
Publisher Summary This chapter focuses on the progress and the current state of structure/function correlations of biomolecules. One of the primary goals of modern …