Smart reprograming of plants against salinity stress using modern biotechnological tools

A Raza, J Tabassum, AZ Fakhar, R Sharif… - Critical reviews in …, 2023 - Taylor & Francis
Climate change gives rise to numerous environmental stresses, including soil salinity.
Salinity/salt stress is the second biggest abiotic factor affecting agricultural productivity …

Rice functional genomics: decades' efforts and roads ahead

R Chen, Y Deng, Y Ding, J Guo, J Qiu, B Wang… - Science China Life …, 2022 - Springer
Rice (Oryza sativa L.) is one of the most important crops in the world. Since the completion of
rice reference genome sequences, tremendous progress has been achieved in …

Long-read sequence assembly: a technical evaluation in barley

M Mascher, T Wicker, J Jenkins, C Plott, T Lux… - The Plant …, 2021 - academic.oup.com
Sequence assembly of large and repeat-rich plant genomes has been challenging,
requiring substantial computational resources and often several complementary sequence …

Benchmarking transposable element annotation methods for creation of a streamlined, comprehensive pipeline

S Ou, W Su, Y Liao, K Chougule, JRA Agda… - Genome biology, 2019 - Springer
Background Sequencing technology and assembly algorithms have matured to the point
that high-quality de novo assembly is possible for large, repetitive genomes. Current …

Modern plant biotechnology as a strategy in addressing climate change and attaining food security

TIK Munaweera, NU Jayawardana… - Agriculture & Food …, 2022 - Springer
Global warming causes a range of negative impacts on plants especially due to rapid
changes in temperatures, alterations of rainfall patterns, floods or drought conditions, and …

DNA sequencing at 40: past, present and future

J Shendure, S Balasubramanian, GM Church… - Nature, 2017 - nature.com
This review commemorates the 40th anniversary of DNA sequencing, a period in which we
have already witnessed multiple technological revolutions and a growth in scale from a few …

A chromosome conformation capture ordered sequence of the barley genome

M Mascher, H Gundlach, A Himmelbach, S Beier… - Nature, 2017 - nature.com
Cereal grasses of the Triticeae tribe have been the major food source in temperate regions
since the dawn of agriculture. Their large genomes are characterized by a high content of …

Phytohormone signaling and crosstalk in regulating drought stress response in plants

P Salvi, M Manna, H Kaur, T Thakur, N Gandass… - Plant Cell Reports, 2021 - Springer
Phytohormones are ubiquitously involved in plant biological processes and regulate cellular
signaling pertaining to unheralded environmental cues, such as salinity, drought, extreme …

Gene duplication and evolution in recurring polyploidization–diploidization cycles in plants

X Qiao, Q Li, H Yin, K Qi, L Li, R Wang, S Zhang… - Genome biology, 2019 - Springer
Background The sharp increase of plant genome and transcriptome data provide valuable
resources to investigate evolutionary consequences of gene duplication in a range of taxa …

Reference genome assemblies reveal the origin and evolution of allohexaploid oat

Y Peng, H Yan, L Guo, C Deng, C Wang, Y Wang… - Nature Genetics, 2022 - nature.com
Common oat (Avena sativa) is an important cereal crop serving as a valuable source of
forage and human food. Although reference genomes of many important crops have been …