Complexity of patterns is key information for human brain to differ objects of about the same size and shape. Like other innate human senses, the complexity perception cannot be easily …
Entropy and free-energy estimation are key in thermodynamic characterization of simulated systems ranging from spin models through polymers, colloids, protein structure, and drug …
Coupled nonlinear oscillators are ubiquitous in dynamical studies. A wealth of behaviors have been found mostly for globally coupled systems. From a complexity perspective, less …
K Makarova, A Makarov, V Strongin, I Titovets… - … of Computational and …, 2023 - Elsevier
We present a new Canonical Multispin-flip Cluster Monte Carlo algorithm for Ising model and describe efficient implementations for hybrid supercomputer. Our method takes …
A rich variety of nonequilibrium dynamical phenomena and processes unambiguously calls for the development of general numerical techniques to probe and estimate a complex …
T Liu, L Simine - Journal of Chemical Information and Modeling, 2024 - ACS Publications
The design of biosequences for biosensing and therapeutics is a challenging multistep search and optimization task. In principle, computational modeling may speed up the design …
A recently introduced model of coupled nonlinear oscillators in a ring is revisited in terms of its information processing capabilities. The use of Lempel-Ziv based entropic measures …
We derive a functional for the entropy contributed by any microscopic degrees of freedom as arising from their measurable pair correlations. Applicable both in and out of equilibrium, this …
While there has been a keen interest in studying computation at the edge of chaos for dynamical systems undergoing a phase transition, this has come under question for cellular …