Structural and evolutionary aspects of two families of non-catalytic domains present in starch and glycogen binding proteins from microbes, plants and animals

Š Janeček, B Svensson, EA MacGregor - Enzyme and microbial technology, 2011 - Elsevier
Starch-binding domains (SBDs) comprise distinct protein modules that bind starch, glycogen
or related carbohydrates and have been classified into different families of carbohydrate …

Immunoglobulin domains in Escherichia coli and other enterobacteria: from pathogenesis to applications in antibody technologies

G Bodelón, C Palomino… - FEMS microbiology …, 2013 - academic.oup.com
The immunoglobulin (Ig) protein domain is widespread in nature having a well-recognized
role in proteins of the immune system. In this review, we describe the proteins containing Ig …

The Unique Branching Patterns of Deinococcus Glycogen Branching Enzymes Are Determined by Their N-Terminal Domains

M Palomo, S Kralj, M Van Der Maarel… - Applied and …, 2009 - Am Soc Microbiol
Glycogen branching enzymes (GBE) or 1, 4-α-glucan branching enzymes (EC 2.4. 1.18)
introduce α-1, 6 branching points in α-glucans, eg, glycogen. To identify structural features in …

From prokaryotes to eukaryotes: insights into the molecular structure of glycogen particles

QH Liu, JW Tang, PB Wen, MM Wang… - Frontiers in molecular …, 2021 - frontiersin.org
Glycogen is a highly-branched polysaccharide that is widely distributed across the three life
domains. It has versatile functions in physiological activities such as energy reserve, osmotic …

[HTML][HTML] The evolution of putative starch-binding domains

M Machovič, Š Janeček - FEBS letters, 2006 - Elsevier
The present bioinformatics analysis was focused on the starch-binding domains (SBDs) and
SBD-like motifs sequentially related to carbohydrate-binding module (CBM) families CBM20 …

Domain evolution in the GH13 pullulanase subfamily with focus on the carbohydrate-binding module family 48

M Machovič, Š Janeček - Biologia, 2008 - Springer
Glycoside hydrolase (GH) family 13 comprises about 30 different specificities. Four of them
have been proposed to form the GH13 pullulanase subfamily: pullulanase, isoamylase …

The different effects of starch synthase IIa mutations or variation on endosperm amylose content of barley, wheat and rice are determined by the distribution of starch …

J Luo, R Ahmed, B Kosar-Hashemi, O Larroque… - Theoretical and Applied …, 2015 - Springer
Key message The distribution of starch synthase I and starch branching enzyme IIb between
the starch granule and amyloplast stroma plays an important role in determining endosperm …

Structure and evolution of glycogen branching enzyme N-termini from bacteria

L Wang, Q Liu, J Hu, J Asenso, MJ Wise, X Wu… - Frontiers in …, 2019 - frontiersin.org
In bacteria, glycogen plays important roles in carbon and energy storage. Its structure has
recently been linked with bacterial environmental durability. Among the essential genes for …

[HTML][HTML] GH13 Glycogen branching enzymes can adapt the substrate chain length towards their preferences via α-1, 4-transglycosylation

ALO Gaenssle, HHM Bax, E Jurak - Enzyme and Microbial Technology, 2021 - Elsevier
Abstract Glycogen branching enzymes (GBEs; 1, 4-α-glucan branching enzyme; EC 2.4.
1.18) have so far been described to be capable of both α-1, 6-transglycosylation (branching) …

Alanine 310 is important for the activity of 1, 4-α-glucan branching enzyme from Geobacillus thermoglucosidans STB02

Y Liu, C Li, Z Gu, C Xin, L Cheng, Y Hong… - International journal of …, 2017 - Elsevier
α-Glucan branching enzyme (GBE) catalyzes the formation of α-1, 6 branch points in starch
or glycogen by hydrolyzing α-1, 4-glucosidic linkages and then synthesizing α-1, 6 …