Cell fate specification and differentiation in the adult mammalian intestine

J Beumer, H Clevers - Nature reviews Molecular cell biology, 2021 - nature.com
Intestinal stem cells at the bottom of crypts fuel the rapid renewal of the different cell types
that constitute a multitasking tissue. The intestinal epithelium facilitates selective uptake of …

WNT as a driver and dependency in cancer

MJ Parsons, T Tammela, LE Dow - Cancer discovery, 2021 - AACR
The WNT signaling pathway is a critical regulator of development and adult tissue
homeostasis and becomes dysregulated in many cancer types. Although hyperactivation of …

Single-cell analysis uncovers fibroblast heterogeneity and criteria for fibroblast and mural cell identification and discrimination

L Muhl, G Genové, S Leptidis, J Liu, L He… - Nature …, 2020 - nature.com
Many important cell types in adult vertebrates have a mesenchymal origin, including
fibroblasts and vascular mural cells. Although their biological importance is undisputed, the …

Spatiotemporal analysis of human intestinal development at single-cell resolution

D Fawkner-Corbett, A Antanaviciute, K Parikh… - Cell, 2021 - cell.com
Development of the human intestine is not well understood. Here, we link single-cell RNA
sequencing and spatial transcriptomics to characterize intestinal morphogenesis through …

Metabolism and colorectal cancer

JC Sedlak, ÖH Yilmaz, J Roper - Annual Review of Pathology …, 2023 - annualreviews.org
Reprogrammed metabolism is a hallmark of colorectal cancer (CRC). CRC cells are geared
toward rapid proliferation, requiring nutrients and the removal of cellular waste in nutrient …

Intra-and inter-cellular rewiring of the human colon during ulcerative colitis

CS Smillie, M Biton, J Ordovas-Montanes, KM Sullivan… - Cell, 2019 - cell.com
Genome-wide association studies (GWAS) have revealed risk alleles for ulcerative colitis
(UC). To understand their cell type specificities and pathways of action, we generate an atlas …

Identification, discrimination and heterogeneity of fibroblasts

U Lendahl, L Muhl, C Betsholtz - Nature communications, 2022 - nature.com
Fibroblasts, the principal cell type of connective tissue, secrete extracellular matrix
components during tissue development, homeostasis, repair and disease. Despite this …

Self-organization and symmetry breaking in intestinal organoid development

D Serra, U Mayr, A Boni, I Lukonin, M Rempfler… - Nature, 2019 - nature.com
Intestinal organoids are complex three-dimensional structures that mimic the cell-type
composition and tissue organization of the intestine by recapitulating the self-organizing …

Structural remodeling of the human colonic mesenchyme in inflammatory bowel disease

J Kinchen, HH Chen, K Parikh, A Antanaviciute… - Cell, 2018 - cell.com
Intestinal mesenchymal cells play essential roles in epithelial homeostasis, matrix
remodeling, immunity, and inflammation. But the extent of heterogeneity within the colonic …

Cancer-associated fibroblasts in gastrointestinal cancer

H Kobayashi, A Enomoto, SL Woods, AD Burt… - Nature reviews …, 2019 - nature.com
The tumour microenvironment, also termed the tumour stroma or tumour mesenchyme,
includes fibroblasts, immune cells, blood vessels and the extracellular matrix and …