Identification of CpG Islands in DNA sequences using short-time Fourier transform

P Garg, S Sharma - Interdisciplinary Sciences: Computational Life …, 2020 - Springer
In the era of big data analysis, genomics data analysis is highly needed to extract the hidden
information present in the DNA sequences. One of the important hidden features present in …

New symmetries and fractal-like structures in the genetic coding system

S Petoukhov, E Petukhova, V Svirin - Advances in Computer Science for …, 2019 - Springer
The achievements of molecular genetics and bioinformatics lead to significant changes in
technological, medical and many other areas of our lives. This article is devoted to new …

An efficient way of identification of protein coding regions of eukaryotic genes using digital FIR filter governed by Ramanujan's Sum

S Kar, M Ganguly - International Journal of Biomedical …, 2023 - inderscienceonline.com
Finding protein coding regions, ie, exons in a gene is a complex problem due to its diverse
nature. In this paper, a novel FIR filtering governed by Ramanujan's Sum is proposed for …

Spectral analysis of DNA on 1-D hydration enthalpy-based numerical mapping using optimal filtering

S Kar, M Ganguly, A Ganguly - … and smart cities: proceedings of ETCCS …, 2022 - Springer
The paper proposed a new numerical coding technique of DNA, based on hydration
enthalpy, to find the coding regions of a gene. The genetic sequences when converted into …

[PDF][PDF] Locating all common subsequences in two DNA sequences

MI Khalil - Int. J. Inf. Technol. Comput. Sci, 2016 - scholar.archive.org
Biological sequence comparison is one of the most important and basic problems in
computational biology. Due to its high demands for computational power and memory, it is a …

Genetic code modelling from the perspective of quantum informatics

E Fimmel, SV Petoukhov - Advances in Artificial Systems for Medicine and …, 2020 - Springer
This paper's aim is to show the possibilities of modelling the information content carried by
quantum mechanical DNA molecules by means of the formalism used in quantum …

Exploring structure and evolution of the genetic code with the software tool GCAT

E Fimmel, M Gumbel, L Strüngmann - … in Artificial Systems for Medicine and …, 2018 - Springer
The genetic code can be seen as the major key to biological self-organisation. In fact, all
living organisms regardless of whether they are plants, bacteria or mammals have the same …

Adaptive Wavelet Transform Based Protein Coding Region Prediction in DNA sequence

L Das, A Tripathy, S Nanda - 2023 1st International Conference …, 2023 - ieeexplore.ieee.org
Protein coding region prediction in a DNA sequence is a challenging issue for the present
researchers. An application of Wavelet Transform (WT) in Genomic signal processing (GSP) …

[PDF][PDF] A new heuristic approach for DNA sequences alignment

MI Khalil - International Journal of Image, Graphics and Signal …, 2015 - mecs-press.org
The problem of comparing DNA sequences is one of the most significant tasks in the field of
computational biology. It helps locating the similarities and differences between pairs of …

[PDF][PDF] Dimensionality Reduction of DNA Sequences through Wavelet Transforms

MC Padole - Recent Advances in Computer Science, 2013 - researchgate.net
In recent years, development in molecular biology and sequencing technology has led to
large scale sequencing of genomes, metagenomics and transcriptome. As a result …