SARS-CoV-2 causes a different cytokine response compared to other cytokine storm-causing respiratory viruses in severely ill patients

M Olbei, I Hautefort, D Modos, A Treveil… - Frontiers in …, 2021 - frontiersin.org
Hyper-induction of pro-inflammatory cytokines, also known as a cytokine storm or cytokine
release syndrome (CRS), is one of the key aspects of the currently ongoing SARS-CoV-2 …

[HTML][HTML] NanoSIMS for biological applications: current practices and analyses

J Nuñez, R Renslow, JB Cliff, CR Anderton - Biointerphases, 2018 - pubs.aip.org
Secondary ion mass spectrometry (SIMS) has become an increasingly utilized tool in
biologically relevant studies. Of these, high lateral resolution methodologies using the …

AutoDock Vina 1.2. 0: New docking methods, expanded force field, and python bindings

J Eberhardt, D Santos-Martins… - Journal of chemical …, 2021 - ACS Publications
AutoDock Vina is arguably one of the fastest and most widely used open-source programs
for molecular docking. However, compared to other programs in the AutoDock Suite, it lacks …

IL-5-producing CD4+ T cells and eosinophils cooperate to enhance response to immune checkpoint blockade in breast cancer

OS Blomberg, L Spagnuolo, H Garner, L Voorwerk… - Cancer Cell, 2023 - cell.com
Immune checkpoint blockade (ICB) has heralded a new era in cancer therapy. Research
into the mechanisms underlying response to ICB has predominantly focused on T cells; …

Streamlined inactivation, amplification, and Cas13-based detection of SARS-CoV-2

J Arizti-Sanz, CA Freije, AC Stanton, BA Petros… - Nature …, 2020 - nature.com
The COVID-19 pandemic has highlighted that new diagnostic technologies are essential for
controlling disease transmission. Here, we develop SHINE (Streamlined Highlighting of …

A gravitational-wave measurement of the Hubble constant following the second observing run of advanced LIGO and Virgo

BP Abbott, R Abbott, TD Abbott… - The Astrophysical …, 2021 - iopscience.iop.org
Gravitational waves (GWs) from compact binary coalescences allow for the direct
measurement of the luminosity distance to their source. This makes them standard-distance …

SABER amplifies FISH: enhanced multiplexed imaging of RNA and DNA in cells and tissues

JY Kishi, SW Lapan, BJ Beliveau, ER West, A Zhu… - Nature …, 2019 - nature.com
Fluorescence in situ hybridization (FISH) reveals the abundance and positioning of nucleic
acid sequences in fixed samples. Despite recent advances in multiplexed amplification of …

The citation advantage of linking publications to research data

G Colavizza, I Hrynaszkiewicz, I Staden, K Whitaker… - PloS one, 2020 - journals.plos.org
Efforts to make research results open and reproducible are increasingly reflected by journal
policies encouraging or mandating authors to provide data availability statements. As a …

Massively parallel de novo protein design for targeted therapeutics

A Chevalier, DA Silva, GJ Rocklin, DR Hicks… - Nature, 2017 - nature.com
De novo protein design holds promise for creating small stable proteins with shapes
customized to bind therapeutic targets. We describe a massively parallel approach for …

Deep convolutional models improve predictions of macaque V1 responses to natural images

SA Cadena, GH Denfield, EY Walker… - PLoS computational …, 2019 - journals.plos.org
Despite great efforts over several decades, our best models of primary visual cortex (V1) still
predict spiking activity quite poorly when probed with natural stimuli, highlighting our limited …